Figure S1. KEGG-based analysis of S24-7 functions. A heatmap of differential completeness of KEGG modules across all 153 genomes analyzed in this study (colored as in Fig. 2 according to their type and study of origin). b Ordination analysis based on CAZy profiles showing that the a-glucan and plant glycan guild tended to be associated with genomes of low and high diversity, respectively, independent of genome quality and as assessed via completeness of KEGG modules (numbers in brackets refer to clusters in the heatmap). Multivariate analysis was calculated using the ADONIS function within the R vegan package (Dixon 2003). (PDF 1472 kb
Figure S1. Time-course (24, 48, 120 and 288 h) dual growth of S. marcescens UENF-22GI with the phyto...
Figure S3. KEGG pathway distributions of midgut unigenes. The genes according to KEGG metabolic path...
Additional file 1: Figure S1. The plastid genome map of holoparasitic C. kwangtungensis. Genes label...
Table S1. Table of all KEGG Orthologies across S24-7 family members and other Bacteroidales spp. (XL...
Table S2. Discriminative KEGG Orthologies between S24-7 family members and other Bacteroidales spp. ...
Figure S1. A phylogenetic tree with divergence time of the eight powdery mildew (PM) genomes. Figure...
Figure S2. Extended phylogenomic tree as described in Fig. 4 and the corresponding methods. Accessi...
Additional file 1: Text S1. Metabolic versatility in Pantoea agglomerans DAPP-PG 734. Table S1. Anti...
KEGG ontologies. Overview of the presence or absence of complete intact KEGG modules in Lactococcus....
Number of genes for all species studied associated with the 25 general COG functional categories. Th...
Pan-genome and Core-genome of the genus Aquimarina . Squares are the values obtained for the differe...
A. Analysis of homologs of the putative PKS42-NRPS34 cluster. On the left, tree inferred by maximum ...
Additional file 1: Figure S1. Phylogenomic analysis of the Ca. Thioglobaceae family using SpeciesTre...
Genome comparison of strain DCY84T and closest Paenibacillus strains. Table S2. COGs analysis of dir...
Fusarium species tree inferred by maximum likelihood analysis of concatenated sequences of 30 housek...
Figure S1. Time-course (24, 48, 120 and 288 h) dual growth of S. marcescens UENF-22GI with the phyto...
Figure S3. KEGG pathway distributions of midgut unigenes. The genes according to KEGG metabolic path...
Additional file 1: Figure S1. The plastid genome map of holoparasitic C. kwangtungensis. Genes label...
Table S1. Table of all KEGG Orthologies across S24-7 family members and other Bacteroidales spp. (XL...
Table S2. Discriminative KEGG Orthologies between S24-7 family members and other Bacteroidales spp. ...
Figure S1. A phylogenetic tree with divergence time of the eight powdery mildew (PM) genomes. Figure...
Figure S2. Extended phylogenomic tree as described in Fig. 4 and the corresponding methods. Accessi...
Additional file 1: Text S1. Metabolic versatility in Pantoea agglomerans DAPP-PG 734. Table S1. Anti...
KEGG ontologies. Overview of the presence or absence of complete intact KEGG modules in Lactococcus....
Number of genes for all species studied associated with the 25 general COG functional categories. Th...
Pan-genome and Core-genome of the genus Aquimarina . Squares are the values obtained for the differe...
A. Analysis of homologs of the putative PKS42-NRPS34 cluster. On the left, tree inferred by maximum ...
Additional file 1: Figure S1. Phylogenomic analysis of the Ca. Thioglobaceae family using SpeciesTre...
Genome comparison of strain DCY84T and closest Paenibacillus strains. Table S2. COGs analysis of dir...
Fusarium species tree inferred by maximum likelihood analysis of concatenated sequences of 30 housek...
Figure S1. Time-course (24, 48, 120 and 288 h) dual growth of S. marcescens UENF-22GI with the phyto...
Figure S3. KEGG pathway distributions of midgut unigenes. The genes according to KEGG metabolic path...
Additional file 1: Figure S1. The plastid genome map of holoparasitic C. kwangtungensis. Genes label...