Additional file 4: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.

BERNARDINO, K. C.
PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de

January 2020

Background: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P ...

Additional file 4: Figure S1. of Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza)

Cynthia Vigueira (3248571)
Linda Small (3467252)
Kenneth Olsen (3248568)

April 2016

Root lengths of PSTOL1 genotypes grown in low and high phosphorus conditions. Plants were measured a...

Additional file 3: of Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Malleswari Gelli (3441917)
Sharon Mitchell (217511)
Kan Liu (250462)
Thomas Clemente (3441911)
Donald Weeks (3441920)
Chi Zhang (9857)
David Holding (3441914)
Ismail Dweikat (436864)

January 2016

The list of differentially expressed genes identified between CK60 and China17 using RNA-seq. (xls 1...

Additional file 5: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Detailed information of the QTLs detected by multi-trait QTL mapping. (DOCX 24 kb

Additional file 1: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Descriptive statistics and variance components for traits assessed in low-P conditions. (field and h...

Additional file 2: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Correlations and p-values among all traits assessed in low-P conditions. (field and hydroponics). (D...

Additional file 3: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Single-trait QTL mapping profiles for grain yield (Gy), phosphorus use efficiency (PUE), phosphorus ...

Additional file 6: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Synteny between sorghum, Arabidopsis and maize for the main QTLs detected in this study. (XLSX 55 kb

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Bernardino, Karine C.
Pastina, Maria Marta
Menezes, Cícero B.
Sousa, Sylvia M. de
Maciel, Laiane S.
Carvalho Jr., Geraldo
Guimarães, Claudia T.
Barros, Beatriz A.
Silva, Luciano da Costa e
Carneiro, Pedro C. S.
Schaffert, Robert E.
Kochian, Leon V.
Magalhaes, Jurandir V.

January 2019

Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P availability...

Additional file 1: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

Statistics of RNA sequences in roots (A) and shoots (B) in maize inbred lines 31778 and CCM454. (XLS...

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine C. Bernardino
Maria Marta Pastina
Cícero B. Menezes
Sylvia M. de Sousa
Laiane S. Maciel
Geraldo Carvalho Jr
Claudia T. Guimarães
Beatriz A. Barros
Luciano da Costa e Silva
Pedro C. S. Carneiro
Robert E. Schaffert
Leon V. Kochian
Jurandir V. Magalhaes

February 2019

Abstract Background Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays rest...

Additional file 4: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

GO classification of common P deficiency-responsive genes between 31778 and CCM454. (PDF 197Â kb

Additional file 6: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

List of genes with significant expression differences in the roots of inbred lines 31778 and CCM454 ...

Additional file 5: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

List of genes with significant expression differences in the shoots of inbred lines 31778 and CCM454...

Additional file 2: of Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Malleswari Gelli (3441917)
Sharon Mitchell (217511)
Kan Liu (250462)
Thomas Clemente (3441911)
Donald Weeks (3441920)
Chi Zhang (9857)
David Holding (3441914)
Ismail Dweikat (436864)

January 2016

Genetic distribution of SNPs discovered using genotyping-by-sequencing (GBS) in CK60 x China17 popul...

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.

BERNARDINO, K. C.
PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de

January 2020

Background: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P ...

Additional file 4: Figure S1. of Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza)

Cynthia Vigueira (3248571)
Linda Small (3467252)
Kenneth Olsen (3248568)

April 2016

Root lengths of PSTOL1 genotypes grown in low and high phosphorus conditions. Plants were measured a...

Additional file 3: of Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Malleswari Gelli (3441917)
Sharon Mitchell (217511)
Kan Liu (250462)
Thomas Clemente (3441911)
Donald Weeks (3441920)
Chi Zhang (9857)
David Holding (3441914)
Ismail Dweikat (436864)

January 2016

The list of differentially expressed genes identified between CK60 and China17 using RNA-seq. (xls 1...

Additional file 5: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Detailed information of the QTLs detected by multi-trait QTL mapping. (DOCX 24 kb

Additional file 1: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Descriptive statistics and variance components for traits assessed in low-P conditions. (field and h...

Additional file 2: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Correlations and p-values among all traits assessed in low-P conditions. (field and hydroponics). (D...

Additional file 3: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Single-trait QTL mapping profiles for grain yield (Gy), phosphorus use efficiency (PUE), phosphorus ...

Additional file 6: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine Bernardino (6413384)
Maria Pastina (6413387)
Cícero Menezes (6413390)
Sylvia Sousa (6413393)
Laiane Maciel (6413396)
Geraldo Jr (6413399)
Claudia Guimarães (6413402)
Beatriz Barros (683137)
Luciano Costa e Silva (6413405)
Pedro Carneiro (6413408)
Robert Schaffert (6413411)
Leon Kochian (5126837)
Jurandir Magalhaes (6413414)

March 2019

Synteny between sorghum, Arabidopsis and maize for the main QTLs detected in this study. (XLSX 55 kb

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Bernardino, Karine C.
Pastina, Maria Marta
Menezes, Cícero B.
Sousa, Sylvia M. de
Maciel, Laiane S.
Carvalho Jr., Geraldo
Guimarães, Claudia T.
Barros, Beatriz A.
Silva, Luciano da Costa e
Carneiro, Pedro C. S.
Schaffert, Robert E.
Kochian, Leon V.
Magalhaes, Jurandir V.

January 2019

Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P availability...

Additional file 1: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

Statistics of RNA sequences in roots (A) and shoots (B) in maize inbred lines 31778 and CCM454. (XLS...

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Karine C. Bernardino
Maria Marta Pastina
Cícero B. Menezes
Sylvia M. de Sousa
Laiane S. Maciel
Geraldo Carvalho Jr
Claudia T. Guimarães
Beatriz A. Barros
Luciano da Costa e Silva
Pedro C. S. Carneiro
Robert E. Schaffert
Leon V. Kochian
Jurandir V. Magalhaes

February 2019

Abstract Background Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays rest...

Additional file 4: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

GO classification of common P deficiency-responsive genes between 31778 and CCM454. (PDF 197Â kb

Additional file 6: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

List of genes with significant expression differences in the roots of inbred lines 31778 and CCM454 ...

Additional file 5: of Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Qingguo Du (3418121)
Kai Wang (21246)
Cheng Xu (352754)
Cheng Zou (173167)
Chuanxiao Xie (191495)
Yunbi Xu (189754)
Wen-Xue Li (189757)

October 2016

List of genes with significant expression differences in the shoots of inbred lines 31778 and CCM454...

Additional file 2: of Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Malleswari Gelli (3441917)
Sharon Mitchell (217511)
Kan Liu (250462)
Thomas Clemente (3441911)
Donald Weeks (3441920)
Chi Zhang (9857)
David Holding (3441914)
Ismail Dweikat (436864)

January 2016

Genetic distribution of SNPs discovered using genotyping-by-sequencing (GBS) in CK60 x China17 popul...

The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.

BERNARDINO, K. C.
PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de

January 2020

Background: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P ...

Additional file 4: Figure S1. of Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza)

Cynthia Vigueira (3248571)
Linda Small (3467252)
Kenneth Olsen (3248568)

April 2016

Root lengths of PSTOL1 genotypes grown in low and high phosphorus conditions. Plants were measured a...

Additional file 3: of Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Malleswari Gelli (3441917)
Sharon Mitchell (217511)
Kan Liu (250462)
Thomas Clemente (3441911)
Donald Weeks (3441920)
Chi Zhang (9857)
David Holding (3441914)
Ismail Dweikat (436864)

January 2016

The list of differentially expressed genes identified between CK60 and China17 using RNA-seq. (xls 1...

Additional file 4: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Abstract

Extracted data

Additional file 4: of The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil

Abstract

Extracted data

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