(A) Setup of the siRNA screening campaign. (B) Classification of the 997 genes investigated with the four IV strains. (C) Venn diagram of genes required for replication of the individual viruses. (D) Virus titers relative to negative control upon knockdown of genes most strictly required for IV replication. Data represent the mean of all siRNAs targeting the specified gene. Data are from the siRNA screen. Positive control: IAV segment 5 (WSN, PAN, VN), XPO1 (THW). Negative control: Non-targeting scrambled sequence siRNA. (E) The genes required for replication of all four IV strains were subjected to gene group enrichment analysis using DAVID functional annotation clustering. Data represent the geometric means of the clusters’ p‐values for t...
<p>Enrichment for luciferase-inducing genes. Frequency distribution of luciferase induction for all ...
<p><b>A.</b> The seven hits selected for further studies were validated by performing deconvolution ...
<p>The work flow was organized into two rounds of screening. If both duplexes produced cilia loss an...
<p>(a) The 558 different genes assayed in the screen ranked according to the p-values assigned to ea...
<p>Effect of gene knockdown by siRNA on EV71 replication analysed from primary screen. 40% reduction...
<p>(A) Ingenuity Pathway Analysis (IPA) was employed to map hit genes that when knocked down by siRN...
<p>Ordered lists with all values for siRNA targets on x-axis available in <a href="http://www.plospa...
<p>(A) RSA reveals many more significant hits (FDR < 0.05) for CRISPR relative to siRNA screening. (...
<p>All genes are aligned on the y-axis (left). The columns represent experiments conducted on days 1...
<p>Vero cells were reverse transfected with non-targeting control (NTC) / gene specific on-target pl...
<p>(a) Schematic of the experimental workflow used to screen the replication of VACV with the drugga...
<p>(A) Schematic representation of the primary genome-wide screen and secondary screens. HEK 293T ce...
Additional file 4: Figure S3. Validation of gene hits identified by genome-wide siRNA screening. The...
<p>A) Neurite length after siRNA-mediated knockdown of 254 different human phosphatases. Activities ...
<p>A set of four biological replicates was used to determine siRNA coverage along the gene. (A) Over...
<p>Enrichment for luciferase-inducing genes. Frequency distribution of luciferase induction for all ...
<p><b>A.</b> The seven hits selected for further studies were validated by performing deconvolution ...
<p>The work flow was organized into two rounds of screening. If both duplexes produced cilia loss an...
<p>(a) The 558 different genes assayed in the screen ranked according to the p-values assigned to ea...
<p>Effect of gene knockdown by siRNA on EV71 replication analysed from primary screen. 40% reduction...
<p>(A) Ingenuity Pathway Analysis (IPA) was employed to map hit genes that when knocked down by siRN...
<p>Ordered lists with all values for siRNA targets on x-axis available in <a href="http://www.plospa...
<p>(A) RSA reveals many more significant hits (FDR < 0.05) for CRISPR relative to siRNA screening. (...
<p>All genes are aligned on the y-axis (left). The columns represent experiments conducted on days 1...
<p>Vero cells were reverse transfected with non-targeting control (NTC) / gene specific on-target pl...
<p>(a) Schematic of the experimental workflow used to screen the replication of VACV with the drugga...
<p>(A) Schematic representation of the primary genome-wide screen and secondary screens. HEK 293T ce...
Additional file 4: Figure S3. Validation of gene hits identified by genome-wide siRNA screening. The...
<p>A) Neurite length after siRNA-mediated knockdown of 254 different human phosphatases. Activities ...
<p>A set of four biological replicates was used to determine siRNA coverage along the gene. (A) Over...
<p>Enrichment for luciferase-inducing genes. Frequency distribution of luciferase induction for all ...
<p><b>A.</b> The seven hits selected for further studies were validated by performing deconvolution ...
<p>The work flow was organized into two rounds of screening. If both duplexes produced cilia loss an...