Table S5. Mutations in strain 04â02981. Mutations detected in mutation accumulation experiment. (PDF 431 kb
Primer sequences used in the initial PCR step of tuf gene fragment amplicon sequencing. (DOC 35Â kb
Table S2. List of 182 variants identified in 32 isolates (after excluding unrelated strains). (XLSX ...
Results of model for effect of variables on context-dependent mutation rates of focal nucleotide. (D...
Table S6. Mutations in strain HO 5096 0412. Mutations detected in mutation accumulation experiment. ...
Table S3. qPCR results. Quantitative PCR results for 46 nasal swab samples. (PDF 513 kb
Table S2. Mutations conferring rifampicin resistance. Nucleotide positions in rpoB gene, nucleotide ...
Table S4. PCR primers. Oligonucleotide sequences and product lengths. (PDF 547 kb
Table S1. Bacterial isolates. Metadata, sources, and references to literature. (PDF 529 kb
Additional figures and tables. Table S1. agr frameshifts. Figure S1. Provenance of strains sequenced...
SNPs and Indels between the consecutive t012 and t021Â S. aureus isolates within the timespan betwee...
Context-dependent mutation rates of focal (center) nucleotides of 64 triplets (top, lagging strand o...
Table S3. List of 81 mutations with predicted modification of protein sequences with COG annotation....
Potential recombinant events (PRE) identified with RDP3 from the alignment of spA from 38 S. aureus ...
Sampling scheme of the S. aureus isolates obtained within the time span between 1995 and 2008 from t...
SNPs and InDels between the isolates of the t331 lineage. The mutations were detected with the âBa...
Primer sequences used in the initial PCR step of tuf gene fragment amplicon sequencing. (DOC 35Â kb
Table S2. List of 182 variants identified in 32 isolates (after excluding unrelated strains). (XLSX ...
Results of model for effect of variables on context-dependent mutation rates of focal nucleotide. (D...
Table S6. Mutations in strain HO 5096 0412. Mutations detected in mutation accumulation experiment. ...
Table S3. qPCR results. Quantitative PCR results for 46 nasal swab samples. (PDF 513 kb
Table S2. Mutations conferring rifampicin resistance. Nucleotide positions in rpoB gene, nucleotide ...
Table S4. PCR primers. Oligonucleotide sequences and product lengths. (PDF 547 kb
Table S1. Bacterial isolates. Metadata, sources, and references to literature. (PDF 529 kb
Additional figures and tables. Table S1. agr frameshifts. Figure S1. Provenance of strains sequenced...
SNPs and Indels between the consecutive t012 and t021Â S. aureus isolates within the timespan betwee...
Context-dependent mutation rates of focal (center) nucleotides of 64 triplets (top, lagging strand o...
Table S3. List of 81 mutations with predicted modification of protein sequences with COG annotation....
Potential recombinant events (PRE) identified with RDP3 from the alignment of spA from 38 S. aureus ...
Sampling scheme of the S. aureus isolates obtained within the time span between 1995 and 2008 from t...
SNPs and InDels between the isolates of the t331 lineage. The mutations were detected with the âBa...
Primer sequences used in the initial PCR step of tuf gene fragment amplicon sequencing. (DOC 35Â kb
Table S2. List of 182 variants identified in 32 isolates (after excluding unrelated strains). (XLSX ...
Results of model for effect of variables on context-dependent mutation rates of focal nucleotide. (D...
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