Additional file 1: of Functional dysbiosis within dental plaque microbiota in cleft lip and palate patients

Figure S1. Number of OTUs, Shannon’s diversity index, and rarefaction curves. Figure S2. PCoA plots with information of appliances. Figure S3. Scatter graphs of mRNA abundances for pairs of interacting core taxa. Figure S4. PCoA plots for the functional profiles assigned using BLASTX. Table S1. Summary of Illumina MiSeq reads and the derived data. Table S2. Rank distribution of species assigned for the rc-rRNA OTUs (relative abundance per participant). Table S3. Rank distribution of the level-1 SEED subsystem functions assigned for the mRNA reads (relative abundance per participant). Table S4. Rank distribution of the level-2 KEGG functions assigned for the mRNA reads (relative abundance per participant). Table S5. Rank distribution of the top 50 species assigned for the mRNA reads (relative abundance per participant). Table S6. Rank distribution of VTiF (mean RPKM values among the participants and the mRNA-to-rRNA ratio). Table S7. Rank distribution of the top 50 VFDB functions assigned for the mRNA reads (relative abundance per participant). Table S8. Rank distribution of the top 50 MvirDB functions assigned for the mRNA reads (relative abundance per participant). (PDF 454 kb