Supplementary file Figure S5. Distribution of high-level KEGG KO categories across pan-genome fractions. (A) absolute values, (B) relative values of four major KO categories. Pan-genome fractions are defined as in Fig. 4. (PDF 560 kb
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...
Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...
Three hundred seventy three prophage sequences predicted in 118 GAS genomes. (TXT 16655 kb
Supplementary file Figure S7. Distribution of orthologous groups with virulence-related genes across...
Supplementary file Table S2. Overrepresented functional categories in different fractions of the pan...
Supplementary file Figure S8. Distributions of (A) the median value of the pN/pS ratio with the Juke...
Supplementary file Figure S2. Distribution of the number of singletons in strains belong to differen...
Supplementary file Figure S3. Two-dimensional projections for the distribution of orthologous groups...
Supplementary file Figure S9. Fractions of nucleotides under purifying selection in upstream fragmen...
Supplementary file Figure S1. Phylogenetic tree of analyzed Streptococcus strains based on alignment...
Supplementary file Figure S10. Dependence of the mean conservation level of nucleotides in indels on...
Supplementary file Figure S11. Phylogenetic trees based on genes involved in parallel inversions. (P...
Supplementary file Figure S4. Dependence of the number of orthologous groups (OGs) assigned a GO ter...
Supplementary file Figure S12. Phylogenetic trees for S. pneumoniae (A), S. suis (B), S. pyogenes (C...
Figure S1. Mutual synteny plot of GAS prophages in each prophage group. A-N: The numbers on x-axes c...
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...
Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...
Three hundred seventy three prophage sequences predicted in 118 GAS genomes. (TXT 16655 kb
Supplementary file Figure S7. Distribution of orthologous groups with virulence-related genes across...
Supplementary file Table S2. Overrepresented functional categories in different fractions of the pan...
Supplementary file Figure S8. Distributions of (A) the median value of the pN/pS ratio with the Juke...
Supplementary file Figure S2. Distribution of the number of singletons in strains belong to differen...
Supplementary file Figure S3. Two-dimensional projections for the distribution of orthologous groups...
Supplementary file Figure S9. Fractions of nucleotides under purifying selection in upstream fragmen...
Supplementary file Figure S1. Phylogenetic tree of analyzed Streptococcus strains based on alignment...
Supplementary file Figure S10. Dependence of the mean conservation level of nucleotides in indels on...
Supplementary file Figure S11. Phylogenetic trees based on genes involved in parallel inversions. (P...
Supplementary file Figure S4. Dependence of the number of orthologous groups (OGs) assigned a GO ter...
Supplementary file Figure S12. Phylogenetic trees for S. pneumoniae (A), S. suis (B), S. pyogenes (C...
Figure S1. Mutual synteny plot of GAS prophages in each prophage group. A-N: The numbers on x-axes c...
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...
Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...
Three hundred seventy three prophage sequences predicted in 118 GAS genomes. (TXT 16655 kb