Top 20 variants; number of reads across dataset as measured by (i) mapping to reference VSG database and by (ii) sequence clustering; the relevant TREU927 reference VSG is indicated in the first column.</p
This is the raw long-read sequencing data used for benchmarking experiments in the manuscript "VeCha...
<p>The graph represents the percentage of unique best mapped reads obtained for each tool as functio...
SNP dataset from GS reference mapper software: contig number, SNP position, reference and variant al...
<p>A) The relationship between the numbers of variant reads divided by total reads for SNVs identifi...
<p>A. The number of identical reads assigned to each cluster. For example, there are approximately 5...
<p>The graph represents the percentage of unique best mapped reads obtained for each tool as functio...
<p>Number of sequences in clusters in the different versions of the chordate section of the database...
<p>(A) Comparison of genotype calling consistency among the five read mapping strategies for all chr...
<p>(A) Data from the TP00005 library. (B) Data from the TP00010 library. OTG-snpcaller exhibits more...
<p>The ten most common nucleotide V3 sequences from samples 10–172, 10–176, and 10–180 -obtained wit...
<p>Barplots of (A) the number of total reads (i.e. number of reads of F3- and F5-tagged paired reads...
<p>The red line corresponds to the proposed multiple-atlas approach, while the rest ten lines corres...
Approximately 90% of calls from Bionano optical mapping are between 10–100 kb in size and few calls ...
<p>Box-and-whisker diagrams showing the dispersion of the variants relative to the representative se...
Figure S3. Mean scores broken down by allele frequency for VVP, CADD and SIFT. Data are for NA12878 ...
This is the raw long-read sequencing data used for benchmarking experiments in the manuscript "VeCha...
<p>The graph represents the percentage of unique best mapped reads obtained for each tool as functio...
SNP dataset from GS reference mapper software: contig number, SNP position, reference and variant al...
<p>A) The relationship between the numbers of variant reads divided by total reads for SNVs identifi...
<p>A. The number of identical reads assigned to each cluster. For example, there are approximately 5...
<p>The graph represents the percentage of unique best mapped reads obtained for each tool as functio...
<p>Number of sequences in clusters in the different versions of the chordate section of the database...
<p>(A) Comparison of genotype calling consistency among the five read mapping strategies for all chr...
<p>(A) Data from the TP00005 library. (B) Data from the TP00010 library. OTG-snpcaller exhibits more...
<p>The ten most common nucleotide V3 sequences from samples 10–172, 10–176, and 10–180 -obtained wit...
<p>Barplots of (A) the number of total reads (i.e. number of reads of F3- and F5-tagged paired reads...
<p>The red line corresponds to the proposed multiple-atlas approach, while the rest ten lines corres...
Approximately 90% of calls from Bionano optical mapping are between 10–100 kb in size and few calls ...
<p>Box-and-whisker diagrams showing the dispersion of the variants relative to the representative se...
Figure S3. Mean scores broken down by allele frequency for VVP, CADD and SIFT. Data are for NA12878 ...
This is the raw long-read sequencing data used for benchmarking experiments in the manuscript "VeCha...
<p>The graph represents the percentage of unique best mapped reads obtained for each tool as functio...
SNP dataset from GS reference mapper software: contig number, SNP position, reference and variant al...