Additional file 3: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Additional file 1: of Discordant lymphoma consisting of mediastinal large B-cell lymphoma and nodular sclerosis Hodgkin lymphoma in the right supraclavicular lymph nodes: a case report

Chun Zhang (29010)
Yuanxue Yi (3537839)
Chunyan Chen (95808)
Jianrong Wang (489848)
Zhu Liu (646037)

December 2015

Gene rearrangements and clonality analysis of immunoglobulin heavy chain gene, Kappa light chain gen...

Additional file 1: Table S1. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation

Giulia De Falco (309102)
Maria Ambrosio (272570)
Fabio Fuligni (165190)
Anna Onnis (361465)
Cristiana Bellan (361467)
Bruno Rocca (3581198)
Mohsen Navari (3581195)
Maryam Etebari (813854)
Lucia Mundo (813848)
Sara Gazaneo (813850)
Fabio Facchetti (376587)
Stefano Pileri (813858)
Lorenzo Leoncini (309107)
Pier Piccaluga (3581201)

October 2015

List of inter and intra chromosomal gene fusion detected by fusion-detection pipeline. (XLS 89 kb

Additional file 5: of Long non-coding RNAs defining major subtypes of B cell precursor acute lymphoblastic leukemia

Alva Rani James (6206588)
Michael Schroeder (10133)
Martin Neumann (276593)
Lorenz Bastian (6206591)
Cornelia Eckert (6206594)
Nicola GĂśkbuget (4035542)
Jutta Tanchez (6206597)
Cornelia Schlee (105296)
Konstandina Isaakidis (6206600)
Stefan Schwartz (276600)
Thomas Burmeister (276604)
Arend Stackelberg (6206603)
Michael Rieger (590736)
Stefanie GĂśllner (6206609)
Martin Horstman (6206606)
Martin Schrappe (5413889)
Renate Kirschner-Schwabe (49606)
Monika BrĂźggemann (5840558)
Carsten MĂźller-Tidow (5817026)
Hubert Serve (106786)
Altuna Akalin (28028)
Claudia Baldus (3579098)

January 2019

Table S4. DNA methylation array dataset. The differentially methylated lncRNAs from three subtypes. ...

Additional file 2: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jรถrg Reinders (6561335)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

File S2. ChIP-Seq data of differentially bound MYC and H3K4 target genes derived from comparison of ...

Additional file 4: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jörg Reinders (559463)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

Figure S4. ADGRE5 IHC staining of cell line and patient tissue samples. (A) Burkitt Lymphoma (BL): C...

Additional file 1: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jรถrg Reinders (6561335)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

Table S1. Compilation of antibodies used for Chromatin Immunoprecipitation (ChIP), Western Blot (WB)...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, Karsten
Dimitrova,Lora
Oker, Elisabeth
Tomaszewski, Nancy
Berg, Erika
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

January 2019

BACKGROUND: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Additional file 3: of Integrative microRNA and mRNA deep-sequencing expression profiling in endemic Burkitt lymphoma

Cliff Oduor (4590136)
Yasin Kaymaz (4590139)
Kiprotich Chelimo (125556)
Juliana Otieno (226195)
John Ong’echa (3938636)
Ann Moormann (4222042)
Jeffrey Bailey (54894)

November 2017

Differentially expressed Genes between eBL tumor cells and GC B cells (logFC > 2, p-value < 0.01 and...

Additional file 3: Table S3. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation

Giulia De Falco (309102)
Maria Ambrosio (272570)
Fabio Fuligni (165190)
Anna Onnis (361465)
Cristiana Bellan (361467)
Bruno Rocca (3581198)
Mohsen Navari (3581195)
Maryam Etebari (813854)
Lucia Mundo (813848)
Sara Gazaneo (813850)
Fabio Facchetti (376587)
Stefano Pileri (813858)
Lorenzo Leoncini (309107)
Pier Piccaluga (3581201)

October 2015

Gene set enrichment analysis for gene ontology categories of 64 genes predicted as targets of microR...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo
Lora Dimitrova
Elisabeth Oker
Nancy Tomaszewski
Erika Berg
Franziska Taruttis
Julia C. Engelmann
Philipp Schwarzfischer
Jörg Reinders
Rainer Spang
Wolfram Gronwald
Peter J. Oefner
Michael Hummel

April 2019

Abstract Background MYC is a heterogeneously expressed transcription factor that plays a multifuncti...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

BACKGROUND: MYC is a heterogeneously expressed transcription factor that plays a multifunctional ro...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, Karsten
Dimitrova, Lora
Oker, Elisabeth
Tomaszewski, Nancy
Berg, Erika
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

January 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Additional file 9: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma

Akanksha Verma (3553664)
Yanwen Jiang (103833)
Wei Du (88790)
Lauren Fairchild (3553661)
Ari Melnick (88754)
Olivier Elemento (7617)

November 2015

DLBCL sample subtype classification. Data showing the classification of the 104 primary DLBCL subtyp...

Additional file 1: of Discordant lymphoma consisting of mediastinal large B-cell lymphoma and nodular sclerosis Hodgkin lymphoma in the right supraclavicular lymph nodes: a case report

Chun Zhang (29010)
Yuanxue Yi (3537839)
Chunyan Chen (95808)
Jianrong Wang (489848)
Zhu Liu (646037)

December 2015

Gene rearrangements and clonality analysis of immunoglobulin heavy chain gene, Kappa light chain gen...

Additional file 1: Table S1. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation

Giulia De Falco (309102)
Maria Ambrosio (272570)
Fabio Fuligni (165190)
Anna Onnis (361465)
Cristiana Bellan (361467)
Bruno Rocca (3581198)
Mohsen Navari (3581195)
Maryam Etebari (813854)
Lucia Mundo (813848)
Sara Gazaneo (813850)
Fabio Facchetti (376587)
Stefano Pileri (813858)
Lorenzo Leoncini (309107)
Pier Piccaluga (3581201)

October 2015

List of inter and intra chromosomal gene fusion detected by fusion-detection pipeline. (XLS 89 kb

Additional file 5: of Long non-coding RNAs defining major subtypes of B cell precursor acute lymphoblastic leukemia

Alva Rani James (6206588)
Michael Schroeder (10133)
Martin Neumann (276593)
Lorenz Bastian (6206591)
Cornelia Eckert (6206594)
Nicola GĂśkbuget (4035542)
Jutta Tanchez (6206597)
Cornelia Schlee (105296)
Konstandina Isaakidis (6206600)
Stefan Schwartz (276600)
Thomas Burmeister (276604)
Arend Stackelberg (6206603)
Michael Rieger (590736)
Stefanie GĂśllner (6206609)
Martin Horstman (6206606)
Martin Schrappe (5413889)
Renate Kirschner-Schwabe (49606)
Monika BrĂźggemann (5840558)
Carsten MĂźller-Tidow (5817026)
Hubert Serve (106786)
Altuna Akalin (28028)
Claudia Baldus (3579098)

January 2019

Table S4. DNA methylation array dataset. The differentially methylated lncRNAs from three subtypes. ...

Additional file 2: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jรถrg Reinders (6561335)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

File S2. ChIP-Seq data of differentially bound MYC and H3K4 target genes derived from comparison of ...

Additional file 4: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jörg Reinders (559463)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

Figure S4. ADGRE5 IHC staining of cell line and patient tissue samples. (A) Burkitt Lymphoma (BL): C...

Additional file 1: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo (3750175)
Lora Dimitrova (3750178)
Elisabeth Oker (197155)
Nancy Tomaszewski (6561332)
Erika Berg (84732)
Franziska Taruttis (1555381)
Julia Engelmann (3440546)
Philipp Schwarzfischer (3750184)
Jรถrg Reinders (6561335)
Rainer Spang (21155)
Wolfram Gronwald (65407)
Peter Oefner (3470186)
Michael Hummel (197180)

April 2019

Table S1. Compilation of antibodies used for Chromatin Immunoprecipitation (ChIP), Western Blot (WB)...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, Karsten
Dimitrova,Lora
Oker, Elisabeth
Tomaszewski, Nancy
Berg, Erika
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

January 2019

BACKGROUND: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Additional file 3: of Integrative microRNA and mRNA deep-sequencing expression profiling in endemic Burkitt lymphoma

Cliff Oduor (4590136)
Yasin Kaymaz (4590139)
Kiprotich Chelimo (125556)
Juliana Otieno (226195)
John Ong’echa (3938636)
Ann Moormann (4222042)
Jeffrey Bailey (54894)

November 2017

Differentially expressed Genes between eBL tumor cells and GC B cells (logFC > 2, p-value < 0.01 and...

Additional file 3: Table S3. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation

Giulia De Falco (309102)
Maria Ambrosio (272570)
Fabio Fuligni (165190)
Anna Onnis (361465)
Cristiana Bellan (361467)
Bruno Rocca (3581198)
Mohsen Navari (3581195)
Maryam Etebari (813854)
Lucia Mundo (813848)
Sara Gazaneo (813850)
Fabio Facchetti (376587)
Stefano Pileri (813858)
Lorenzo Leoncini (309107)
Pier Piccaluga (3581201)

October 2015

Gene set enrichment analysis for gene ontology categories of 64 genes predicted as targets of microR...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Karsten Kleo
Lora Dimitrova
Elisabeth Oker
Nancy Tomaszewski
Erika Berg
Franziska Taruttis
Julia C. Engelmann
Philipp Schwarzfischer
Jörg Reinders
Rainer Spang
Wolfram Gronwald
Peter J. Oefner
Michael Hummel

April 2019

Abstract Background MYC is a heterogeneously expressed transcription factor that plays a multifuncti...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

BACKGROUND: MYC is a heterogeneously expressed transcription factor that plays a multifunctional ro...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, Karsten
Dimitrova, Lora
Oker, Elisabeth
Tomaszewski, Nancy
Berg, Erika
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

January 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Kleo, K.
Dimitrova, L.
Oker, E.
Tomaszewski, N.
Berg, E.
Taruttis, Franziska
Engelmann, Julia C.
Schwarzfischer, Philipp
Reinders, Jörg
Spang, Rainer
Gronwald, Wolfram
Oefner, Peter J.
Hummel, Michael

April 2019

Background: MYC is a heterogeneously expressed transcription factor that plays a multifunctional rol...

Additional file 9: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma

Akanksha Verma (3553664)
Yanwen Jiang (103833)
Wei Du (88790)
Lauren Fairchild (3553661)
Ari Melnick (88754)
Olivier Elemento (7617)

November 2015

DLBCL sample subtype classification. Data showing the classification of the 104 primary DLBCL subtyp...

Additional file 1: of Discordant lymphoma consisting of mediastinal large B-cell lymphoma and nodular sclerosis Hodgkin lymphoma in the right supraclavicular lymph nodes: a case report

Chun Zhang (29010)
Yuanxue Yi (3537839)
Chunyan Chen (95808)
Jianrong Wang (489848)
Zhu Liu (646037)

December 2015

Gene rearrangements and clonality analysis of immunoglobulin heavy chain gene, Kappa light chain gen...

Additional file 1: Table S1. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation

Giulia De Falco (309102)
Maria Ambrosio (272570)
Fabio Fuligni (165190)
Anna Onnis (361465)
Cristiana Bellan (361467)
Bruno Rocca (3581198)
Mohsen Navari (3581195)
Maryam Etebari (813854)
Lucia Mundo (813848)
Sara Gazaneo (813850)
Fabio Facchetti (376587)
Stefano Pileri (813858)
Lorenzo Leoncini (309107)
Pier Piccaluga (3581201)

October 2015

List of inter and intra chromosomal gene fusion detected by fusion-detection pipeline. (XLS 89 kb

Additional file 5: of Long non-coding RNAs defining major subtypes of B cell precursor acute lymphoblastic leukemia

Alva Rani James (6206588)
Michael Schroeder (10133)
Martin Neumann (276593)
Lorenz Bastian (6206591)
Cornelia Eckert (6206594)
Nicola GĂśkbuget (4035542)
Jutta Tanchez (6206597)
Cornelia Schlee (105296)
Konstandina Isaakidis (6206600)
Stefan Schwartz (276600)
Thomas Burmeister (276604)
Arend Stackelberg (6206603)
Michael Rieger (590736)
Stefanie GĂśllner (6206609)
Martin Horstman (6206606)
Martin Schrappe (5413889)
Renate Kirschner-Schwabe (49606)
Monika BrĂźggemann (5840558)
Carsten MĂźller-Tidow (5817026)
Hubert Serve (106786)
Altuna Akalin (28028)
Claudia Baldus (3579098)

January 2019

Table S4. DNA methylation array dataset. The differentially methylated lncRNAs from three subtypes. ...

Additional file 3: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Abstract

Extracted data

Additional file 3: of Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma

Abstract

Extracted data

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