Figure S3. Distribution of pathways in culture-independent or culture-enriched microbiomes. Pathways are considered present in a condition if at least one EC number of this pathway is present in at least one sample of said condition. (PDF 136 kb
Figure S5. Boxplot showing total relative abundance of species with biotin biosynthesis (BIO-B) and/...
Figure S3. Number of identified species by culturomics (a), with aerointolerant (b) and aerotolerant...
Figure S1. Circular plot with links representing the prevalence of vitamin metabolism among differen...
Table S4. Number of resistance genes observed per culture-independent or culture-enriched microbiome...
Table S5. Number of resistance genes observed per microbiome and selectome with 70 percent identity ...
Figure S7. Distance in nucleotides between the core and accessory resistance genes from mobile eleme...
Figure S1. Diversity and abundance distribution of bacterial families in culture-independent or cult...
Table S7. Families of antibiotic resistance genes associated with potential species of origin. (XLSX...
Figure S2. Relationship between the depth of sequencing and sum of the assembled contigs associated ...
Figure S4. Proportion of samples and enzymes positive per cluster per condition. For each combinatio...
Figure S6. Association between genome content clustering and content in resistance genes for 3346 Es...
Figure S5. Association between genome content clustering and content in resistance genes for 432 Ent...
Comparison of the effect of OTU picking method on the proportion of OTUs cultured. Figure S2 Compari...
Figure S1. Gene accumulation curve for dog, pig, mouse, and human gut microbiomes. (PDF 1676Â kb
Figure S2. Circular plot with links representing the prevalence of vitamin metabolism among differen...
Figure S5. Boxplot showing total relative abundance of species with biotin biosynthesis (BIO-B) and/...
Figure S3. Number of identified species by culturomics (a), with aerointolerant (b) and aerotolerant...
Figure S1. Circular plot with links representing the prevalence of vitamin metabolism among differen...
Table S4. Number of resistance genes observed per culture-independent or culture-enriched microbiome...
Table S5. Number of resistance genes observed per microbiome and selectome with 70 percent identity ...
Figure S7. Distance in nucleotides between the core and accessory resistance genes from mobile eleme...
Figure S1. Diversity and abundance distribution of bacterial families in culture-independent or cult...
Table S7. Families of antibiotic resistance genes associated with potential species of origin. (XLSX...
Figure S2. Relationship between the depth of sequencing and sum of the assembled contigs associated ...
Figure S4. Proportion of samples and enzymes positive per cluster per condition. For each combinatio...
Figure S6. Association between genome content clustering and content in resistance genes for 3346 Es...
Figure S5. Association between genome content clustering and content in resistance genes for 432 Ent...
Comparison of the effect of OTU picking method on the proportion of OTUs cultured. Figure S2 Compari...
Figure S1. Gene accumulation curve for dog, pig, mouse, and human gut microbiomes. (PDF 1676Â kb
Figure S2. Circular plot with links representing the prevalence of vitamin metabolism among differen...
Figure S5. Boxplot showing total relative abundance of species with biotin biosynthesis (BIO-B) and/...
Figure S3. Number of identified species by culturomics (a), with aerointolerant (b) and aerotolerant...
Figure S1. Circular plot with links representing the prevalence of vitamin metabolism among differen...