Additional file 5: of FGMP: assessing fungal genome completeness
- Ousmane CissĂŠ (6590801)
- Jason Stajich (5225312)
Publication date
April 2019
DOIAbstract
Lifestyle, genome characteristics and completeness estimates of 166 fungi. (XLSX 47 kb
Lifestyle, genome characteristics and completeness estimates of 166 fungi. (XLSX 47 kb
A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative con...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Genome characteristics, completeness estimates and run times of 90 fungal genomes. (XLSX 16 kb
Assessment of genome completeness in 57 fungal genome assemblies. b Plots of genome completeness in ...
Comparison of protein markers used for genome completeness estimation. (PDF 231 kb
Scatterplot showing the relationship between FGMP running times and the level of fragmentation for d...
Phylogeny of nine fungal species used for the detection of highly conserved nucleotide elements. The...
BackgroundInexpensive high-throughput DNA sequencing has democratized access to genetic information ...
Background Inexpensive high-throughput DNA sequencing has democratized access to genetic information...
Percent gene overlap between genomes. Description: The percentage of genes from the query genome in ...
Number of flavohemoglobins and protein IDs found in the genome sequences of the Aspergillus species....
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Comparative genomic analysis of the Fusarium venenatum genome with other fungi. This reveals close s...
Counts of the putative genes per CAZy family in the 9 genomes used in this study. Table S6. Counts o...
A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative con...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Genome characteristics, completeness estimates and run times of 90 fungal genomes. (XLSX 16 kb
Assessment of genome completeness in 57 fungal genome assemblies. b Plots of genome completeness in ...
Comparison of protein markers used for genome completeness estimation. (PDF 231 kb
Scatterplot showing the relationship between FGMP running times and the level of fragmentation for d...
Phylogeny of nine fungal species used for the detection of highly conserved nucleotide elements. The...
BackgroundInexpensive high-throughput DNA sequencing has democratized access to genetic information ...
Background Inexpensive high-throughput DNA sequencing has democratized access to genetic information...
Percent gene overlap between genomes. Description: The percentage of genes from the query genome in ...
Number of flavohemoglobins and protein IDs found in the genome sequences of the Aspergillus species....
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Comparative genomic analysis of the Fusarium venenatum genome with other fungi. This reveals close s...
Counts of the putative genes per CAZy family in the 9 genomes used in this study. Table S6. Counts o...
A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative con...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
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