Figure S4. Manually confirmed DTM63 insertion sites. (A) Manually confirmed case of C. grandis. (B). Manually confirmed case of C. sinensis. (C) Manually confirmed case of C. clementina. (D) Manually confirmed case of C. ichngensis. Sequences in blue represent TSD and the “N” in red represent a copy full-length DTM63. The corresponding homologous regions were listed in Additional file 7: Table S3. (DOCX 584 kb
Chromosome distribution of citrus-specific genes (CSGs) and orphan genes in sweet orange genome. The...
Complete list and classification of LRR-RLKs from C. clementina, C. sinensis and A. thaliana. Citrus...
Figure S1. The design of primers for reverse transcription (RT) and qPCR amplifying Ca. L. asiaticus...
Table S2. Information of newly inserted MITEs in different genomic regions of three Citrus species. ...
Table S1. Information of conserved and non-conserved MITEs insertion between different genomic regio...
Figure S2. The pipeline of LTR retrotransposons classification and annotation. (DOCX 475 kb
Abstract Background Miniature inverted-repeat transposable elements (MITEs) and long terminal repeat...
List of the annotations and genome proportion of clusters in C. clementina. (XLSX 28 kb
FISH distribution patterns of the repetitive DNAs in 23 investigated genotypes in Citrus and related...
Summary of reads from Citrus sinensis infected with CTV-B2/CaLas-B232 or CTV-B6/CaLas-B232. Reads we...
Comparison of RT-qPCR and RNA-Seq estimates of gene expression in diseased sweet orange. X-axis: Abb...
List of four species and their genomic sequence and DNA material source information used in this stu...
Statistics of the tandem duplicated paralogues sequences from C. clementina LRR-XII. Comparative dat...
Table S1. Primer sequences of candidate genes on polyembryonic locus for RT-PCR. (XLSX 10 kb
A large number of expressed sequences tags are available for Citrus spp., which provides an opportun...
Chromosome distribution of citrus-specific genes (CSGs) and orphan genes in sweet orange genome. The...
Complete list and classification of LRR-RLKs from C. clementina, C. sinensis and A. thaliana. Citrus...
Figure S1. The design of primers for reverse transcription (RT) and qPCR amplifying Ca. L. asiaticus...
Table S2. Information of newly inserted MITEs in different genomic regions of three Citrus species. ...
Table S1. Information of conserved and non-conserved MITEs insertion between different genomic regio...
Figure S2. The pipeline of LTR retrotransposons classification and annotation. (DOCX 475 kb
Abstract Background Miniature inverted-repeat transposable elements (MITEs) and long terminal repeat...
List of the annotations and genome proportion of clusters in C. clementina. (XLSX 28 kb
FISH distribution patterns of the repetitive DNAs in 23 investigated genotypes in Citrus and related...
Summary of reads from Citrus sinensis infected with CTV-B2/CaLas-B232 or CTV-B6/CaLas-B232. Reads we...
Comparison of RT-qPCR and RNA-Seq estimates of gene expression in diseased sweet orange. X-axis: Abb...
List of four species and their genomic sequence and DNA material source information used in this stu...
Statistics of the tandem duplicated paralogues sequences from C. clementina LRR-XII. Comparative dat...
Table S1. Primer sequences of candidate genes on polyembryonic locus for RT-PCR. (XLSX 10 kb
A large number of expressed sequences tags are available for Citrus spp., which provides an opportun...
Chromosome distribution of citrus-specific genes (CSGs) and orphan genes in sweet orange genome. The...
Complete list and classification of LRR-RLKs from C. clementina, C. sinensis and A. thaliana. Citrus...
Figure S1. The design of primers for reverse transcription (RT) and qPCR amplifying Ca. L. asiaticus...