Phylogenetic relationships and species-specific genes.
- Danyu Shen (113434)
- Zhaoyang Tang (6109220)
- Cong Wang (107450)
- Jing Wang (6206297)
- Yumei Dong (819762)
- Yang Chen (9737)
- Yun Wei (245421)
- Biao Cheng (276122)
- Meiqian Zhang (6630977)
- Laura J. Grenville-Briggs (421705)
- Brett M. Tyler (19744)
- Daolong Dou (113437)
- Ai Xia (130524)
Publication date
April 2019
DOI Publisher
Public Library of Science (PLoS)Abstract
(A) Genome-based phylogenetic relationships of P. guiyangense and other oomycetes. The neighbor-joining tree was constructed from concatenated alignment of 248 core eukaryotic genes (CEGs) identified by CEGMA analysis. (B) Enrichment of PFAM domains in P. guiyangense-specific genes. The fold-enrichment (y-axis) corresponds to the frequency of a given PFAM domain in the species-specific genes divided by the frequency in the rest of the proteome.</p
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