Additional file 2: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Additional file 3: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Differentially methylated regions between different menstrual cycle phases. The methylation data of ...

Expression of epigenetic effectors in decidualizing human endometrial stromal cells

Grimaldi, Giulia
Christian, Mark
Quenby, Siobhan
Brosens, Jan J.

September 2012

Cyclic differentiation of human endometrial stromal cells (HESCs) into decidual cells is a highly co...

Additional file 5: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Pathway analysis of hypo- and hypermethylated genes in endometrial tissue using g:profiler bioinform...

Additional file 5: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S5. Differentially expressed genes (106 genes) during decidualization under ESC-specific DNA h...

Additional file 3: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S3. Primer pairs used in real-time RT-PCR and sodium bisulfite sequencing. (XLSX 10 kb

Additional file 4: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S4. ESC-hypomethylated genes (average beta-value from − 300 to + 700 bp is < 0.2) and their me...

Additional file 6: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S1. DNA methylation status of the CpGs in UBE2D2 and COG5. A; DNA methylation statuses of the...

Additional file 7: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S2. DNA methylation and histone modification statuses in the IGFBP-1 and PRL promoter regions...

Additional file 9: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S4. Comparison of the expression status of the ESC-specific hypomethylated genes between the ...

Additional file 8: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S3. mRNA expression status of IGFBP-1 and PRL. mRNA expression of IGFBP-1 and PRL were analyz...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

September 2018

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

September 2018

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Additional file 1: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Principal component analysis describing DNA methylation data across all studied endometrial samples....

Additional file 2: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Differentially methylated regions between women with endometriosis and healthy women. The methylatio...

Additional file 3: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Differentially methylated regions between different menstrual cycle phases. The methylation data of ...

Expression of epigenetic effectors in decidualizing human endometrial stromal cells

Grimaldi, Giulia
Christian, Mark
Quenby, Siobhan
Brosens, Jan J.

September 2012

Cyclic differentiation of human endometrial stromal cells (HESCs) into decidual cells is a highly co...

Additional file 5: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Pathway analysis of hypo- and hypermethylated genes in endometrial tissue using g:profiler bioinform...

Additional file 5: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S5. Differentially expressed genes (106 genes) during decidualization under ESC-specific DNA h...

Additional file 3: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S3. Primer pairs used in real-time RT-PCR and sodium bisulfite sequencing. (XLSX 10 kb

Additional file 4: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Table S4. ESC-hypomethylated genes (average beta-value from − 300 to + 700 bp is < 0.2) and their me...

Additional file 6: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S1. DNA methylation status of the CpGs in UBE2D2 and COG5. A; DNA methylation statuses of the...

Additional file 7: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S2. DNA methylation and histone modification statuses in the IGFBP-1 and PRL promoter regions...

Additional file 9: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S4. Comparison of the expression status of the ESC-specific hypomethylated genes between the ...

Additional file 8: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Ryo Maekawa (424388)
Isao Tamura (424390)
Masahiro Shinagawa (6649181)
Yumiko Mihara (6649184)
Shun Sato (189473)
Maki Okada (424392)
Toshiaki Taketani (6649187)
Hiroshi Tamura (371719)
Norihiro Sugino (424394)

April 2019

Figure S3. mRNA expression status of IGFBP-1 and PRL. mRNA expression of IGFBP-1 and PRL were analyz...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

September 2018

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization

Katoh, Noriko
Kuroda, Keiji
Tomikawa, Junko
Ogata-Kawata, Hiroko
Ozaki, Rie
Ochiai, Asako
Kitade, Mari
Takeda, Satoru
Nakabayashi, Kazuhiko
Hata, Kenichiro

September 2018

Aim: Decidualization is essential for embryo implantation and placental development. We aimed to obt...

Additional file 1: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Principal component analysis describing DNA methylation data across all studied endometrial samples....

Additional file 2: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Differentially methylated regions between women with endometriosis and healthy women. The methylatio...

Additional file 3: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Differentially methylated regions between different menstrual cycle phases. The methylation data of ...

Expression of epigenetic effectors in decidualizing human endometrial stromal cells

Grimaldi, Giulia
Christian, Mark
Quenby, Siobhan
Brosens, Jan J.

September 2012

Cyclic differentiation of human endometrial stromal cells (HESCs) into decidual cells is a highly co...

Additional file 5: of The influence of menstrual cycle and endometriosis on endometrial methylome

Merli Saare (485282)
Vijayachitra Modhukur (3568406)
Marina Suhorutshenko (434098)
Balaji Rajashekar (522958)
Kadri Rekker (485281)
Deniss SĂľritsa (3568415)
Helle Karro (45883)
Pille Soplepmann (3568409)
Andrei SĂľritsa (3568412)
Cecilia Lindgren (258113)
Nilufer Rahmioglu (374713)
Alexander Drong (262560)
Christian Becker (49615)
Krina Zondervan (17965)
Andres Salumets (276270)
Maire Peters (485284)

January 2016

Pathway analysis of hypo- and hypermethylated genes in endometrial tissue using g:profiler bioinform...

Additional file 2: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Abstract

Extracted data

Additional file 2: of Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

Abstract

Extracted data

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