Figure S2. The analysis of the length distribution of CDS, PacBio reads and lncRNA number. A, the length distribution of blast and Estscan-predicted CDS in unigenes in Illumina sequencing data, respectively. B and C, the length distribution of blast CDS in unigenes, Subreads, and consensus reads in PacBio sequencing data, respectively. D, the venn figure of lncRNA number predicted in different softwares. E and F, the distribution of SSR motifs in transcriptome generated from different platform. (TIF 1145 kb
Table S2. Summary of read mapping of peach (cv. HJ and cv. YL) and mandarin (cv. PK and cv. YP) tra...
Sequencing Assessment. (A) Sequencing saturation analysis result; (B) Distribution statistics of rea...
The coverage of the clean reads for transcripts. a The coverage counted for YD libraries of three bi...
Figure S3. Gene functional annotation of unigenes in transcriptome data from different platform. A-D...
Figure S1. Comparison of PacBiosubreads quality and corrected reads. (TIF 1683 kb
Figure S5. The FPKM level of ST5a_b_c under different treatments. * and ** notes p < 0.05 and 0.01 v...
Table S1. Significant GO classifications associated with dfifferentially expressed genes (DEGs) indu...
Table S2. Significant KEGG pathways associated with dfifferentially expressed genes (DEGs) induced b...
Figure S4. The glucosinolate biosynthesis pathway and related DEGs induced by sodium selenite treatm...
Figure S1. Overview of Sacha Inchi transcriptome assembly and the characteristics of the homology se...
Transcriptome CDS predicted by BLASTx and ESTScan. (A) The length distribution of CDS using BLASTx, ...
Summary of results obtained using Roche-based deep sequencing platform. Predicted full-length CDS in...
Additional file 4: Supplemental Table 2. GS biosynthesis and degradation related genes in Chinese ka...
Figure S1. The transcript lengths of each size-selected library. Each size-selected library had the ...
Gene coverage calculation (Table S1), reciprocal best BLAST paring (Table S2), full annotation and R...
Table S2. Summary of read mapping of peach (cv. HJ and cv. YL) and mandarin (cv. PK and cv. YP) tra...
Sequencing Assessment. (A) Sequencing saturation analysis result; (B) Distribution statistics of rea...
The coverage of the clean reads for transcripts. a The coverage counted for YD libraries of three bi...
Figure S3. Gene functional annotation of unigenes in transcriptome data from different platform. A-D...
Figure S1. Comparison of PacBiosubreads quality and corrected reads. (TIF 1683 kb
Figure S5. The FPKM level of ST5a_b_c under different treatments. * and ** notes p < 0.05 and 0.01 v...
Table S1. Significant GO classifications associated with dfifferentially expressed genes (DEGs) indu...
Table S2. Significant KEGG pathways associated with dfifferentially expressed genes (DEGs) induced b...
Figure S4. The glucosinolate biosynthesis pathway and related DEGs induced by sodium selenite treatm...
Figure S1. Overview of Sacha Inchi transcriptome assembly and the characteristics of the homology se...
Transcriptome CDS predicted by BLASTx and ESTScan. (A) The length distribution of CDS using BLASTx, ...
Summary of results obtained using Roche-based deep sequencing platform. Predicted full-length CDS in...
Additional file 4: Supplemental Table 2. GS biosynthesis and degradation related genes in Chinese ka...
Figure S1. The transcript lengths of each size-selected library. Each size-selected library had the ...
Gene coverage calculation (Table S1), reciprocal best BLAST paring (Table S2), full annotation and R...
Table S2. Summary of read mapping of peach (cv. HJ and cv. YL) and mandarin (cv. PK and cv. YP) tra...
Sequencing Assessment. (A) Sequencing saturation analysis result; (B) Distribution statistics of rea...
The coverage of the clean reads for transcripts. a The coverage counted for YD libraries of three bi...