Figure S2. Divergence distribution of all detected L1 and B1 sequences. Percent divergence from the corresponding subfamily consensus sequences are plotted in 1% bins. Species and retrotransposon names are indicated at the top of each panel. (PDF 36 kb
Sampling information for Brandt’s vole. Table S2. Summary statistics for twelve microsatellite loci ...
Cumulative distribution of sequence divergence of nucleotide alignments between each pair of samples...
Ed). Proportional likelihood values and associated significance levels for ancestral area reconstruc...
Figure S1. Maximum likelihood phylogeny of detected L1 subfamilies. Reconstructed O. palustris and S...
Table S2. Statistics and designation of B1 subfamilies and families. “Ory” stands for O. palustris a...
Table S1. Statistics and designation of L1 subfamilies and families. “Ory” stands for O. palustris a...
Alignment of L1 subfamily sequences used in the tables and figures. CpG sites with evidence of methy...
Alignment of B1 subfamily sequences used in the tables and figures. CpG sites with evidence of methy...
Brandt’s vole population structure based on 12 microsatellites loci as implemented by STRUCTURE. A) ...
FIGURE 2. Phylogenetic relationships for species of Eligmodontia resulting from the maximum-likeliho...
Figure S1. Sequence alignment of all GDPD-like SMaseD/PLD domains used for phylogenetic tree constru...
Details of the comparisons between our backward and the forward-like algorithms used to perform the ...
Table S1. Median values of substitution rates for non-synonymous sites (dN) and synonymous sites (dS...
Figure 4. Divergence-time tree of the Orientallactaga sibirica complex. Numbers above branches show ...
Sigmodontinae is a high diverse rodent subfamily with difficult taxonomic identification, which play...
Sampling information for Brandt’s vole. Table S2. Summary statistics for twelve microsatellite loci ...
Cumulative distribution of sequence divergence of nucleotide alignments between each pair of samples...
Ed). Proportional likelihood values and associated significance levels for ancestral area reconstruc...
Figure S1. Maximum likelihood phylogeny of detected L1 subfamilies. Reconstructed O. palustris and S...
Table S2. Statistics and designation of B1 subfamilies and families. “Ory” stands for O. palustris a...
Table S1. Statistics and designation of L1 subfamilies and families. “Ory” stands for O. palustris a...
Alignment of L1 subfamily sequences used in the tables and figures. CpG sites with evidence of methy...
Alignment of B1 subfamily sequences used in the tables and figures. CpG sites with evidence of methy...
Brandt’s vole population structure based on 12 microsatellites loci as implemented by STRUCTURE. A) ...
FIGURE 2. Phylogenetic relationships for species of Eligmodontia resulting from the maximum-likeliho...
Figure S1. Sequence alignment of all GDPD-like SMaseD/PLD domains used for phylogenetic tree constru...
Details of the comparisons between our backward and the forward-like algorithms used to perform the ...
Table S1. Median values of substitution rates for non-synonymous sites (dN) and synonymous sites (dS...
Figure 4. Divergence-time tree of the Orientallactaga sibirica complex. Numbers above branches show ...
Sigmodontinae is a high diverse rodent subfamily with difficult taxonomic identification, which play...
Sampling information for Brandt’s vole. Table S2. Summary statistics for twelve microsatellite loci ...
Cumulative distribution of sequence divergence of nucleotide alignments between each pair of samples...
Ed). Proportional likelihood values and associated significance levels for ancestral area reconstruc...
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