a) Supplementary Methods (Microbiome); b) Supplementary References; c) Additional file 1: Figures S1 & S2. (DOCX 47 kb
Represents the line plot showing the mean percent abundance measure along with the standard error fo...
Number of sequences obtained from each condition and sample. Table S2. Comparison of oral microbial ...
Additional file 1: Table S1. Statistical P values of alpha diversity indices among different groups....
Figure S1. tSNE showing clustering of oral and BAL samples. Yellow: oral wash (OW); Red: bronchoalve...
The number of replicates per week and reads mapping to each sample. (PDF 180Â kb
Figure S3. Relative abundance of main taxa in the lung microbiota. For most monkeys, the microbial c...
Human oral cavity diagram drawn by SitePainter [ 35 ]. Different oral sites are identified using dif...
Composition of the bacterial community at the phylum level for individual PCP+ and PCP- samples. (DO...
Summary of microbiome samples. Human oral cavity samples came from HMP with associated abbreviations...
Tables of study data, a meta-regression of VAP incidence and listing of 100 references. (PDF 740Â kb
Figure S1. Rarefaction curve of samples collected from P. aeruginosa VAP patients and control subjec...
Supplemental Figure S1: Functional shifts in the core salivary microbiome during various dentition s...
Figure S1. Prevalence of OTUs classified at the Order (a, for water samples) and Class (b, for air s...
Value for the top quartile (75th percentile) for frequency distributions of taxa stratified by subje...
Comparison of Illumina MiSeq and Roche/454 sequencing applied to identical samples. (A) Subjects 1–5...
Represents the line plot showing the mean percent abundance measure along with the standard error fo...
Number of sequences obtained from each condition and sample. Table S2. Comparison of oral microbial ...
Additional file 1: Table S1. Statistical P values of alpha diversity indices among different groups....
Figure S1. tSNE showing clustering of oral and BAL samples. Yellow: oral wash (OW); Red: bronchoalve...
The number of replicates per week and reads mapping to each sample. (PDF 180Â kb
Figure S3. Relative abundance of main taxa in the lung microbiota. For most monkeys, the microbial c...
Human oral cavity diagram drawn by SitePainter [ 35 ]. Different oral sites are identified using dif...
Composition of the bacterial community at the phylum level for individual PCP+ and PCP- samples. (DO...
Summary of microbiome samples. Human oral cavity samples came from HMP with associated abbreviations...
Tables of study data, a meta-regression of VAP incidence and listing of 100 references. (PDF 740Â kb
Figure S1. Rarefaction curve of samples collected from P. aeruginosa VAP patients and control subjec...
Supplemental Figure S1: Functional shifts in the core salivary microbiome during various dentition s...
Figure S1. Prevalence of OTUs classified at the Order (a, for water samples) and Class (b, for air s...
Value for the top quartile (75th percentile) for frequency distributions of taxa stratified by subje...
Comparison of Illumina MiSeq and Roche/454 sequencing applied to identical samples. (A) Subjects 1–5...
Represents the line plot showing the mean percent abundance measure along with the standard error fo...
Number of sequences obtained from each condition and sample. Table S2. Comparison of oral microbial ...
Additional file 1: Table S1. Statistical P values of alpha diversity indices among different groups....
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