International audienceLearning regulatory networks from time-series of gene expression is a challenging task. We propose to use synthetic data to analyze the ability of a state-space model to retrieve the network structure while varying a number of relevant problem parameters. ROC curves together with new tools such as spectral clustering of local solutions found by EM are used to analyze these results and provide relevant insights
Background: In the analysis of effects by cell treatment such as drug dosing, identifying changes on...
Understanding the genetic regulatory networks, the discovery of interactions between genes and under...
State Space Model (SSM) is an approach to inferring gene regulatory networks. It requires less compu...
peer reviewedLearning regulatory networks from time-series of gene expres- sion is a challenging t...
Abstract Background A widely used approach to reconstruct regulatory networks from time-series data ...
International audienceMotivation : Modern experimental techniques for time-course measurement of gen...
<div><p>Comprehensive understanding of gene regulatory networks (GRNs) is a major challenge in the f...
Motivation: Reverse engineering of genetic regulatory networks from experimental data is the first s...
Reconstructing transcriptional regulatory networks is an important task in functional genomics. Data...
<div><p>Reconstructing transcriptional regulatory networks is an important task in functional genomi...
Due to the limitations of available gene expression data, (i.e. noise and size of time series), mode...
A major challenge in systems biology is the ability to model complex regulatory interactions. This c...
Motivation: Genetic networks regulate key processes in living cells. Various methods have been sugge...
Dynamic gene-regulatory networks are complex since the interaction patterns between their components...
Abstract. With the increasing availability of experimental data on gene-gene and protein-protein int...
Background: In the analysis of effects by cell treatment such as drug dosing, identifying changes on...
Understanding the genetic regulatory networks, the discovery of interactions between genes and under...
State Space Model (SSM) is an approach to inferring gene regulatory networks. It requires less compu...
peer reviewedLearning regulatory networks from time-series of gene expres- sion is a challenging t...
Abstract Background A widely used approach to reconstruct regulatory networks from time-series data ...
International audienceMotivation : Modern experimental techniques for time-course measurement of gen...
<div><p>Comprehensive understanding of gene regulatory networks (GRNs) is a major challenge in the f...
Motivation: Reverse engineering of genetic regulatory networks from experimental data is the first s...
Reconstructing transcriptional regulatory networks is an important task in functional genomics. Data...
<div><p>Reconstructing transcriptional regulatory networks is an important task in functional genomi...
Due to the limitations of available gene expression data, (i.e. noise and size of time series), mode...
A major challenge in systems biology is the ability to model complex regulatory interactions. This c...
Motivation: Genetic networks regulate key processes in living cells. Various methods have been sugge...
Dynamic gene-regulatory networks are complex since the interaction patterns between their components...
Abstract. With the increasing availability of experimental data on gene-gene and protein-protein int...
Background: In the analysis of effects by cell treatment such as drug dosing, identifying changes on...
Understanding the genetic regulatory networks, the discovery of interactions between genes and under...
State Space Model (SSM) is an approach to inferring gene regulatory networks. It requires less compu...