Genetic diversity of Sicyopterus japonicus as revealed by mitochondrial DNA sequencing

To examine the genetic diversity of Sicyopterus japonicus, 448 sites of the control region of the mitochondrial DNA were analyzed in 77 specimens from the four localities of Okinawa, Kochi, Wakayama, and Shizuoka in Japan. A total of 74 haplotypes were found in the individuals examined. The same haplotypes occurred in Okinawa and Kochi, Kochi and Wakayama, and two specimens in Wakayama. The average sequence in genetic characteristics within localities varied from 1.7% in Kochi, 1.6% in Wakayama to 1.4% in Okinawa. There was no significant difference in genetic characteristics among the three locations of Wakayama, Kochi, and Okinawa (10,000 times permutation test, P>0.05). The number of specimens from Shizuoka was too small to compare to the other three locations. The neighbor-joining tree of the mitochondrial DNA haplotypes for all specimens constructed from the Kimura\u27s two-parameter distances suggested no evidence of genetic subdivision of S. japonicus. These results suggested that this species has a single panmictic population and their larvae probably have a high dispersal ability during their oceanic stage