Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Distribution, organization and expression of genes concerned with anaerobic lactate utilization in human intestinal bacteria

Sheridan, Paul
Louis, Petra
Tsompanidou, Eleni
Shaw, Sophie
Harmsen, Hermie J. M.
Duncan, Sylvia
Flint, Harry J.
Walker, Alan

January 2022

Funding information PL, SHD, HJF, AWW and the Rowett Institute received core financial support from ...

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Laverde Gomez, Jenny Angelica
Mukhopadhya, Indrani
Duncan, Sylvia H.
Louis, Petra
Shaw, Sophie
Collie-Duguid, Elaina
Crost, Emmanuelle
Juge, Nathalie
Flint, Harry J.

January 2019

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Laverde Gomez, Jenny Angelica
Mukhopadhya, Indrani
Duncan, Sylvia H.
Louis, Petra
Shaw, Sophie
Collie-Duguid, Elaina
Crost, Emmanuelle
Juge, Nathalie
Flint, Harry J.

January 2019

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Thi Phuong Nam Bui
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J. M.
de Vos, Willem M.
Plugge, Caroline M.

November 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Thi Phuong Nam Bui
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J. M.
de Vos, Willem M.
Plugge, Caroline M.

November 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Bui, Thi Phuong Nam
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J.M.
Vos, Willem M., de
Plugge, Caroline M.

January 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Bui, Thi Phuong Nam
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J.M.
de Vos, Willem M.
Plugge, Caroline M.

January 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

Ze, Xiaolei
David, Ben
Laverde Gomez, Jenny
Dassa, Bareket
Sheridan, Paul O
Duncan, Sylvia H
Louis, Petra Gisela Helen
Henrissat, Bernard
Juge, Natahlie
Koropatkin, Nicole M
Bayer, Edward A.
Flint, Harry J

September 2015

ACKNOWLEDGMENTS We acknowledge support from BBSRC grant no. BB/L009951/1, from the Scottish governme...

Formate-Dependent Growth and Homoacetogenic Fermentation by a Bacterium from Human Feces: Description of Bryantella formatexigens gen. nov., sp. nov.

Wolin, Meyer J.
Miller, Terry L.
Collins, Matthew D.
Lawson, Paul A.

October 2003

Formate stimulates growth of a new bacterium from human feces. With high formate, it ferments glucos...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Distribution, organization and expression of genes concerned with anaerobic lactate utilization in human intestinal bacteria

Sheridan, Paul
Louis, Petra
Tsompanidou, Eleni
Shaw, Sophie
Harmsen, Hermie J. M.
Duncan, Sylvia
Flint, Harry J.
Walker, Alan

January 2022

Funding information PL, SHD, HJF, AWW and the Rowett Institute received core financial support from ...

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Laverde Gomez, Jenny Angelica
Mukhopadhya, Indrani
Duncan, Sylvia H.
Louis, Petra
Shaw, Sophie
Collie-Duguid, Elaina
Crost, Emmanuelle
Juge, Nathalie
Flint, Harry J.

January 2019

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Laverde Gomez, Jenny Angelica
Mukhopadhya, Indrani
Duncan, Sylvia H.
Louis, Petra
Shaw, Sophie
Collie-Duguid, Elaina
Crost, Emmanuelle
Juge, Nathalie
Flint, Harry J.

January 2019

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Thi Phuong Nam Bui
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J. M.
de Vos, Willem M.
Plugge, Caroline M.

November 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Thi Phuong Nam Bui
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J. M.
de Vos, Willem M.
Plugge, Caroline M.

November 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Bui, Thi Phuong Nam
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J.M.
Vos, Willem M., de
Plugge, Caroline M.

January 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Mutual Metabolic Interactions in Co-cultures of the Intestinal Anaerostipes rhamnosivorans With an Acetogen, Methanogen, or Pectin-Degrader Affecting Butyrate Production

Bui, Thi Phuong Nam
Schols, Henk A.
Jonathan, Melliana
Stams, Alfons J.M.
de Vos, Willem M.
Plugge, Caroline M.

January 2019

The human intestinal tract harbors diverse and complex microbial communities that have a vast metabo...

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

Ze, Xiaolei
David, Ben
Laverde Gomez, Jenny
Dassa, Bareket
Sheridan, Paul O
Duncan, Sylvia H
Louis, Petra Gisela Helen
Henrissat, Bernard
Juge, Natahlie
Koropatkin, Nicole M
Bayer, Edward A.
Flint, Harry J

September 2015

ACKNOWLEDGMENTS We acknowledge support from BBSRC grant no. BB/L009951/1, from the Scottish governme...

Formate-Dependent Growth and Homoacetogenic Fermentation by a Bacterium from Human Feces: Description of Bryantella formatexigens gen. nov., sp. nov.

Wolin, Meyer J.
Miller, Terry L.
Collins, Matthew D.
Lawson, Paul A.

October 2003

Formate stimulates growth of a new bacterium from human feces. With high formate, it ferments glucos...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

January 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria

Shetty, Sudarshan A.
Kuipers, Ben
Atashgahi, Siavash
Aalvink, Steven
Smidt, Hauke
de Vos, Willem M.

April 2022

Knowledge of the functional roles and interspecies interactions are crucial for improving our unders...

Distribution, organization and expression of genes concerned with anaerobic lactate utilization in human intestinal bacteria

Sheridan, Paul
Louis, Petra
Tsompanidou, Eleni
Shaw, Sophie
Harmsen, Hermie J. M.
Duncan, Sylvia
Flint, Harry J.
Walker, Alan

January 2022

Funding information PL, SHD, HJF, AWW and the Rowett Institute received core financial support from ...

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Abstract

Extracted data

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Abstract

Extracted data

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