Heatmap of Pearson correlations between samples, based on log10 expression counts across contigs. The heatmap was produced using the pheatmap R package [81], and rows and columns were clustered using hierarchical clustering using the Euclidean distance and complete linkage. (PDF 193Â kb
A hierarchical heat map showing the transformed expression values for transcripts (mRNA and lncRNA)....
List of 7,077 genes ordered by their rank product after the rank product analysis looking for up-reg...
Table S3. The number of aligned reads in a search of the NCBI nt database using 10,000 randomly sele...
Raw counts of mapped reads per contig and sample. The contig expression corresponds to the number of...
Contigs mapped per library. R204, R245, R41 and R78 correspond to the colony replicate and the last ...
Dynamic expression of contigs encoding Halloween genes and ecdysone receptor across the Varroa repro...
Co-expressed contigs during the adult mite cycle. The co-expression analysis was performed for conti...
Enriched GO terms in clusters of contigs co-expressed during the mite cycle. Each worksheet reports ...
Abundance of viruses across the reproductive cycle of foundress and different conditions of adult Va...
Dynamic expression of contigs encoding vitellogenin and the large lipid transfer protein across the ...
List of contigs encoding genes from the RNAi pathways, sialome, and neurotransmitters and neuropepti...
Distribution of normalized FPKM. Histograms of the normalized FPKM values in the different samples s...
Background: The parasite Varroa destructor represents a significant threat to honeybee colonies. Ind...
GO terms significantly over-represented in mite genes that are down-regulated in the A. mellifera ho...
Genes associated with forkhead also segregate with position in the colony cycle. Heatmap showing Euc...
A hierarchical heat map showing the transformed expression values for transcripts (mRNA and lncRNA)....
List of 7,077 genes ordered by their rank product after the rank product analysis looking for up-reg...
Table S3. The number of aligned reads in a search of the NCBI nt database using 10,000 randomly sele...
Raw counts of mapped reads per contig and sample. The contig expression corresponds to the number of...
Contigs mapped per library. R204, R245, R41 and R78 correspond to the colony replicate and the last ...
Dynamic expression of contigs encoding Halloween genes and ecdysone receptor across the Varroa repro...
Co-expressed contigs during the adult mite cycle. The co-expression analysis was performed for conti...
Enriched GO terms in clusters of contigs co-expressed during the mite cycle. Each worksheet reports ...
Abundance of viruses across the reproductive cycle of foundress and different conditions of adult Va...
Dynamic expression of contigs encoding vitellogenin and the large lipid transfer protein across the ...
List of contigs encoding genes from the RNAi pathways, sialome, and neurotransmitters and neuropepti...
Distribution of normalized FPKM. Histograms of the normalized FPKM values in the different samples s...
Background: The parasite Varroa destructor represents a significant threat to honeybee colonies. Ind...
GO terms significantly over-represented in mite genes that are down-regulated in the A. mellifera ho...
Genes associated with forkhead also segregate with position in the colony cycle. Heatmap showing Euc...
A hierarchical heat map showing the transformed expression values for transcripts (mRNA and lncRNA)....
List of 7,077 genes ordered by their rank product after the rank product analysis looking for up-reg...
Table S3. The number of aligned reads in a search of the NCBI nt database using 10,000 randomly sele...