Additional file 1: of Neuropilin-1 promotes the oncogenic Tenascin-C/integrin Î˛3 pathway and modulates chemoresistance in breast cancer cells

Additional file 1: of Tumor-derived exosomes induce N2 polarization of neutrophils to promote gastric cancer cell migration

Xu Zhang (49484)
Hui Shi (278337)
Xiao Yuan (522103)
Pengcheng Jiang (2015869)
Hui Qian (110856)
Wenrong Xu (110863)

October 2018

Figure S1. Gastric cancer cell-derived conditioned medium induced pro-inflammatory factor gene expre...

Additional file 1: of Trefoil factors peptide-3 is associated with residual invasive breast carcinoma following neoadjuvant chemotherapy

Suhail Al-Salam (518026)
Manjusha Sudhadevi (6323177)
Aktham Awwad (6323180)
Mohamed Al Bashir (6323183)

February 2019

Table S1. Correlation between TFF3 expression and response to neoadjuvant chemotherapy. Table S2. Co...

Additional file 3: of Prosaposin activates the androgen receptor and potentiates resistance to endocrine treatment in breast cancer

Azlena Ali (3565394)
Laura Creevey (3565400)
Yuan Hao (632534)
Damian McCartan (3565397)
Peadar OâGaora (3565388)
Arnold Hill (3565382)
Leonie Young (3565385)
Marie McIlroy (3565391)

September 2015

Table: HOXC11 KD upregulatedÂ genes. HOXC11 differentially expressed genes (DEGs) upregulated after ...

Additional file 2: of Neuropilin-1 promotes the oncogenic Tenascin-C/integrin β3 pathway and modulates chemoresistance in breast cancer cells

Adviti Naik (673163)
Aida Al-Yahyaee (5177063)
Nada Abdullah (5177069)
Juda-El Sam (5177072)
Noura Al-Zeheimi (5177066)
Mahmoud Yaish (3855586)
Sirin Adham (3463352)

May 2018

Figure S1. Cellular response to NRP-1 overexpression. NRP-1 overexpression significantly increased A...

Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression

Jin-Yong He (6100892)
Xiao-Hui Wei (6100895)
Si-Jing Li (6100898)
Yang Liu (4829)
Hao-Lin Hu (6100901)
Zheng-Zheng Li (1637104)
Xin-Hong Kuang (6100904)
Lai Wang (23747)
Xin Shi (139139)
Sheng-Tao Yuan (6100907)
Li Sun (4624)

December 2018

Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characteriza...

Additional file 1: of Blockade of PDGFRÎ˛ circumvents resistance to MEK-JAK inhibition via intratumoral CD8+ T-cells infiltrationÂ in triple-negative breast cancer

Murugan Kalimutho (6375365)
Debottam Sinha (6375368)
Deepak Mittal (4967743)
Sriganesh Srihari (3542939)
Devathri Nanayakkara (6375371)
Shagufta Shafique (759049)
Prahlad Raninga (6375374)
Purba Nag (6375377)
Kate Parsons (6375380)
Kum Khanna (3588107)

February 2019

Table S1. List of small interfering RNA (siRNA), primers for mutagenesis, primers for RT-qPCR and an...

Additional file 2: of MEDI3039, a novel highly potent tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) receptor 2 agonist, causes regression of orthotopic tumors and inhibits outgrowth of metastatic triple-negative breast cancer

Yoshimi Greer (6374504)
Samuel Gilbert (6374507)
Brunilde Gril (202357)
Rajesh Narwal (4425985)
Danielle Peacock Brooks (6374510)
David Tice (3173028)
Patricia Steeg (6374513)
Stanley Lipkowitz (253942)

February 2019

Expression of different markers in various breast cancer cell lines. Western blot showing different ...

Additional file 1: Figure S1. of Neuropilin-2 induced by transforming growth factor-β augments migration of hepatocellular carcinoma cells

Philipp Wittmann (3489800)
Markus Grubinger (113205)
Christian Gröger (2991750)
Heidemarie Huber (30926)
Wolfgang Sieghart (654547)
Markus Peck-Radosavljevic (143105)
Wolfgang Mikulits (30930)

November 2015

Correlation of NRP2 expression and TGF-β1 expression in vivo. The tissue array comprising 133 HCC pa...

Additional file 1: of Extracellular gamma-synuclein promotes tumor cell motility by activating β1 integrin-focal adhesion kinase signaling pathway and increasing matrix metalloproteinase-24, -2 protein secretion

Caiyun Liu (778012)
Like Qu (111934)
Chuanke Zhao (700092)
Chengchao Shou (111936)

June 2018

Table S1. Detailed information of antibodies used in the study. Table S2. Clinicopathologic characte...

Additional file 1: of Loss of the transcriptional repressor TGIF1 results in enhanced Kras-driven development of pancreatic cancer

Ching-Chieh Weng (6716045)
Mei-Jen Hsieh (6716048)
Chia-Chen Wu (392526)
Yu-Chun Lin (36446)
Yan-Shen Shan (424776)
Wen-Chun Hung (303185)
Li-Tzong Chen (388257)
Kuang-Hung Cheng (771984)

May 2019

Table S1. List of the primary antibodies used in this study, and information on working dilutions of...

Additional file 1: of Immunotherapy of triple-negative breast cancer with cathepsin D-targeting antibodies

Yahya Ashraf (2278519)
Hanane Mansouri (6296147)
Valérie Laurent-Matha (6296150)
Lindsay Alcaraz (6296153)
Pascal Roger (2333854)
Séverine Guiu (3603593)
Danielle Derocq (230988)
Gautier Robin (80691)
Henri-Alexandre Michaud (247573)
Helène Delpech (6296156)
Marta Jarlier (438685)
Martine Pugnière (57241)
Bruno Robert (86929)
Anthony Puel (6296159)
Lucie Martin (6296162)
Flavie Landomiel (6296165)
Thomas Bourquard (352815)
Oussama Achour (6296168)
Ingrid Fruitier-Arnaudin (2551495)
Alexandre Pichard (753509)
Emmanuel Deshayes (6296174)
Andrei Turtoi (457036)
Anne Poupon (138761)
Joëlle Simony-Lafontaine (6296183)
Florence Boissière-Michot (6296186)
Nelly Pirot (256703)
Florence Bernex (61689)
William Jacot (3422492)
Stanislas Manoir (6296189)
Charles Theillet (6296192)
Jean-Pierre Pouget (438693)
Isabelle Navarro-Teulon (438692)
Nathalie Bonnefoy (134104)
André Pèlegrin (5648674)
Thierry Chardès (6296195)
Pierre Martineau (6238)
Emmanuelle Liaudet-Coopman (231007)

February 2019

Table S1. Nucleotide sequences of the primers used for qPCR experiments. (PDF 163 kb

Additional file 1: of Tetraspanin 1 promotes epithelial-to-mesenchymal transition and metastasis of cholangiocarcinoma via PI3K/AKT signaling

Yan Wang (15435)
Yingjian Liang (300784)
Guangchao Yang (5225111)
Yaliang Lan (5225114)
Jihua Han (813010)
Jiabei Wang (345448)
Dalong Yin (345445)
Ruipeng Song (300788)
Tongsen Zheng (345447)
Shugeng Zhang (6050306)
Shangha Pan (201039)
Xirui Liu (5225102)
Mingxi Zhu (5225108)
Yao Liu (173014)
Yifeng Cui (5225105)
Fanzheng Meng (635696)
Bo Zhang (6559)
Shuhang Liang (6050309)
Hongrui Guo (6050312)
Yufeng Liu (307498)
Md Hassan (6050315)
Lianxin Liu (300790)

December 2018

Table S1. Target sequences of vshRNAs used in this study. Table S2. Primary antibodies for WB, IHC, ...

Additional file 9 of N6-methyladenosine-modified circIGF2BP3 inhibits CD8+ T-cell responses to facilitate tumor immune evasion by promoting the deubiquitination of PD-L1 in non-small cell lung cancer

Zhenchuan Liu (9185108)
Tingting Wang (123983)
Yunlang She (6599117)
Kaiqing Wu (1492621)
Shaorui Gu (9185111)
Lei Li (29537)
Chenglai Dong (9185114)
Chang Chen (30907)
Yongxin Zhou (11308649)

August 2021

Additional file 9: Table S1. Antibodies and peptides used in this study. Table S2. Reagents used in ...

Additional file 2: of PI3KÎą/Î´ inhibition promotes anti-tumor immunity through direct enhancement of effector CD8+ T-cell activity

Larissa Carnevalli (179142)
Charles Sinclair (6158843)
Molly Taylor (6158846)
Pablo Gutierrez (6158849)
Sophie Langdon (6158852)
Anna Coenen-Stass (1571842)
Lorraine Mooney (372137)
Adina Hughes (6158855)
Laura Jarvis (6158858)
Anna Staniszewska (5892953)
Claire Crafter (1981513)
Ben Sidders (35030)
Elizabeth Hardaker (6158861)
Kevin Hudson (1629772)
Simon Barry (255454)

December 2018

Table S1. Immuno-phenotyping antibodies used for tumor flow cytometry. (DOCX 13 kb

Additional file 3: of TFAP2C promotes stemness and chemotherapeutic resistance in colorectal cancer via inactivating hippo signaling pathway

Xu Wang (28596)
Di Sun (300365)
Jiandong Tai (2586805)
Si Chen (164760)
Miao Yu (199182)
Dong Ren (135842)
Lei Wang (6656)

February 2018

Table S3. A list of primers used in the reactions for real-time RT-PCR. (PDF 61Â kb

Additional file 1: of Tumor-derived exosomes induce N2 polarization of neutrophils to promote gastric cancer cell migration

Xu Zhang (49484)
Hui Shi (278337)
Xiao Yuan (522103)
Pengcheng Jiang (2015869)
Hui Qian (110856)
Wenrong Xu (110863)

October 2018

Figure S1. Gastric cancer cell-derived conditioned medium induced pro-inflammatory factor gene expre...

Additional file 1: of Trefoil factors peptide-3 is associated with residual invasive breast carcinoma following neoadjuvant chemotherapy

Suhail Al-Salam (518026)
Manjusha Sudhadevi (6323177)
Aktham Awwad (6323180)
Mohamed Al Bashir (6323183)

February 2019

Table S1. Correlation between TFF3 expression and response to neoadjuvant chemotherapy. Table S2. Co...

Additional file 3: of Prosaposin activates the androgen receptor and potentiates resistance to endocrine treatment in breast cancer

Azlena Ali (3565394)
Laura Creevey (3565400)
Yuan Hao (632534)
Damian McCartan (3565397)
Peadar OâGaora (3565388)
Arnold Hill (3565382)
Leonie Young (3565385)
Marie McIlroy (3565391)

September 2015

Table: HOXC11 KD upregulatedÂ genes. HOXC11 differentially expressed genes (DEGs) upregulated after ...

Additional file 2: of Neuropilin-1 promotes the oncogenic Tenascin-C/integrin β3 pathway and modulates chemoresistance in breast cancer cells

Adviti Naik (673163)
Aida Al-Yahyaee (5177063)
Nada Abdullah (5177069)
Juda-El Sam (5177072)
Noura Al-Zeheimi (5177066)
Mahmoud Yaish (3855586)
Sirin Adham (3463352)

May 2018

Figure S1. Cellular response to NRP-1 overexpression. NRP-1 overexpression significantly increased A...

Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression

Jin-Yong He (6100892)
Xiao-Hui Wei (6100895)
Si-Jing Li (6100898)
Yang Liu (4829)
Hao-Lin Hu (6100901)
Zheng-Zheng Li (1637104)
Xin-Hong Kuang (6100904)
Lai Wang (23747)
Xin Shi (139139)
Sheng-Tao Yuan (6100907)
Li Sun (4624)

December 2018

Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characteriza...

Additional file 1: of Blockade of PDGFRÎ˛ circumvents resistance to MEK-JAK inhibition via intratumoral CD8+ T-cells infiltrationÂ in triple-negative breast cancer

Murugan Kalimutho (6375365)
Debottam Sinha (6375368)
Deepak Mittal (4967743)
Sriganesh Srihari (3542939)
Devathri Nanayakkara (6375371)
Shagufta Shafique (759049)
Prahlad Raninga (6375374)
Purba Nag (6375377)
Kate Parsons (6375380)
Kum Khanna (3588107)

February 2019

Table S1. List of small interfering RNA (siRNA), primers for mutagenesis, primers for RT-qPCR and an...

Additional file 2: of MEDI3039, a novel highly potent tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) receptor 2 agonist, causes regression of orthotopic tumors and inhibits outgrowth of metastatic triple-negative breast cancer

Yoshimi Greer (6374504)
Samuel Gilbert (6374507)
Brunilde Gril (202357)
Rajesh Narwal (4425985)
Danielle Peacock Brooks (6374510)
David Tice (3173028)
Patricia Steeg (6374513)
Stanley Lipkowitz (253942)

February 2019

Expression of different markers in various breast cancer cell lines. Western blot showing different ...

Additional file 1: Figure S1. of Neuropilin-2 induced by transforming growth factor-β augments migration of hepatocellular carcinoma cells

Philipp Wittmann (3489800)
Markus Grubinger (113205)
Christian Gröger (2991750)
Heidemarie Huber (30926)
Wolfgang Sieghart (654547)
Markus Peck-Radosavljevic (143105)
Wolfgang Mikulits (30930)

November 2015

Correlation of NRP2 expression and TGF-β1 expression in vivo. The tissue array comprising 133 HCC pa...

Additional file 1: of Extracellular gamma-synuclein promotes tumor cell motility by activating β1 integrin-focal adhesion kinase signaling pathway and increasing matrix metalloproteinase-24, -2 protein secretion

Caiyun Liu (778012)
Like Qu (111934)
Chuanke Zhao (700092)
Chengchao Shou (111936)

June 2018

Table S1. Detailed information of antibodies used in the study. Table S2. Clinicopathologic characte...

Additional file 1: of Loss of the transcriptional repressor TGIF1 results in enhanced Kras-driven development of pancreatic cancer

Ching-Chieh Weng (6716045)
Mei-Jen Hsieh (6716048)
Chia-Chen Wu (392526)
Yu-Chun Lin (36446)
Yan-Shen Shan (424776)
Wen-Chun Hung (303185)
Li-Tzong Chen (388257)
Kuang-Hung Cheng (771984)

May 2019

Table S1. List of the primary antibodies used in this study, and information on working dilutions of...

Additional file 1: of Immunotherapy of triple-negative breast cancer with cathepsin D-targeting antibodies

Yahya Ashraf (2278519)
Hanane Mansouri (6296147)
Valérie Laurent-Matha (6296150)
Lindsay Alcaraz (6296153)
Pascal Roger (2333854)
Séverine Guiu (3603593)
Danielle Derocq (230988)
Gautier Robin (80691)
Henri-Alexandre Michaud (247573)
Helène Delpech (6296156)
Marta Jarlier (438685)
Martine Pugnière (57241)
Bruno Robert (86929)
Anthony Puel (6296159)
Lucie Martin (6296162)
Flavie Landomiel (6296165)
Thomas Bourquard (352815)
Oussama Achour (6296168)
Ingrid Fruitier-Arnaudin (2551495)
Alexandre Pichard (753509)
Emmanuel Deshayes (6296174)
Andrei Turtoi (457036)
Anne Poupon (138761)
Joëlle Simony-Lafontaine (6296183)
Florence Boissière-Michot (6296186)
Nelly Pirot (256703)
Florence Bernex (61689)
William Jacot (3422492)
Stanislas Manoir (6296189)
Charles Theillet (6296192)
Jean-Pierre Pouget (438693)
Isabelle Navarro-Teulon (438692)
Nathalie Bonnefoy (134104)
André Pèlegrin (5648674)
Thierry Chardès (6296195)
Pierre Martineau (6238)
Emmanuelle Liaudet-Coopman (231007)

February 2019

Table S1. Nucleotide sequences of the primers used for qPCR experiments. (PDF 163 kb

Additional file 1: of Tetraspanin 1 promotes epithelial-to-mesenchymal transition and metastasis of cholangiocarcinoma via PI3K/AKT signaling

Yan Wang (15435)
Yingjian Liang (300784)
Guangchao Yang (5225111)
Yaliang Lan (5225114)
Jihua Han (813010)
Jiabei Wang (345448)
Dalong Yin (345445)
Ruipeng Song (300788)
Tongsen Zheng (345447)
Shugeng Zhang (6050306)
Shangha Pan (201039)
Xirui Liu (5225102)
Mingxi Zhu (5225108)
Yao Liu (173014)
Yifeng Cui (5225105)
Fanzheng Meng (635696)
Bo Zhang (6559)
Shuhang Liang (6050309)
Hongrui Guo (6050312)
Yufeng Liu (307498)
Md Hassan (6050315)
Lianxin Liu (300790)

December 2018

Table S1. Target sequences of vshRNAs used in this study. Table S2. Primary antibodies for WB, IHC, ...

Additional file 9 of N6-methyladenosine-modified circIGF2BP3 inhibits CD8+ T-cell responses to facilitate tumor immune evasion by promoting the deubiquitination of PD-L1 in non-small cell lung cancer

Zhenchuan Liu (9185108)
Tingting Wang (123983)
Yunlang She (6599117)
Kaiqing Wu (1492621)
Shaorui Gu (9185111)
Lei Li (29537)
Chenglai Dong (9185114)
Chang Chen (30907)
Yongxin Zhou (11308649)

August 2021

Additional file 9: Table S1. Antibodies and peptides used in this study. Table S2. Reagents used in ...

Additional file 2: of PI3KÎą/Î´ inhibition promotes anti-tumor immunity through direct enhancement of effector CD8+ T-cell activity

Larissa Carnevalli (179142)
Charles Sinclair (6158843)
Molly Taylor (6158846)
Pablo Gutierrez (6158849)
Sophie Langdon (6158852)
Anna Coenen-Stass (1571842)
Lorraine Mooney (372137)
Adina Hughes (6158855)
Laura Jarvis (6158858)
Anna Staniszewska (5892953)
Claire Crafter (1981513)
Ben Sidders (35030)
Elizabeth Hardaker (6158861)
Kevin Hudson (1629772)
Simon Barry (255454)

December 2018

Table S1. Immuno-phenotyping antibodies used for tumor flow cytometry. (DOCX 13 kb

Additional file 3: of TFAP2C promotes stemness and chemotherapeutic resistance in colorectal cancer via inactivating hippo signaling pathway

Xu Wang (28596)
Di Sun (300365)
Jiandong Tai (2586805)
Si Chen (164760)
Miao Yu (199182)
Dong Ren (135842)
Lei Wang (6656)

February 2018

Table S3. A list of primers used in the reactions for real-time RT-PCR. (PDF 61Â kb

Additional file 1: of Tumor-derived exosomes induce N2 polarization of neutrophils to promote gastric cancer cell migration

Xu Zhang (49484)
Hui Shi (278337)
Xiao Yuan (522103)
Pengcheng Jiang (2015869)
Hui Qian (110856)
Wenrong Xu (110863)

October 2018

Figure S1. Gastric cancer cell-derived conditioned medium induced pro-inflammatory factor gene expre...

Additional file 1: of Trefoil factors peptide-3 is associated with residual invasive breast carcinoma following neoadjuvant chemotherapy

Suhail Al-Salam (518026)
Manjusha Sudhadevi (6323177)
Aktham Awwad (6323180)
Mohamed Al Bashir (6323183)

February 2019

Table S1. Correlation between TFF3 expression and response to neoadjuvant chemotherapy. Table S2. Co...

Additional file 3: of Prosaposin activates the androgen receptor and potentiates resistance to endocrine treatment in breast cancer

Azlena Ali (3565394)
Laura Creevey (3565400)
Yuan Hao (632534)
Damian McCartan (3565397)
Peadar OâGaora (3565388)
Arnold Hill (3565382)
Leonie Young (3565385)
Marie McIlroy (3565391)

September 2015

Table: HOXC11 KD upregulatedÂ genes. HOXC11 differentially expressed genes (DEGs) upregulated after ...

Additional file 1: of Neuropilin-1 promotes the oncogenic Tenascin-C/integrin Î˛3 pathway and modulates chemoresistance in breast cancer cells

Abstract

Extracted data

Additional file 1: of Neuropilin-1 promotes the oncogenic Tenascin-C/integrin Î˛3 pathway and modulates chemoresistance in breast cancer cells

Abstract

Extracted data

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