<p><b>A.</b> Conserved genes, <b>B.</b> Unique genes. For each strain, the mean value of CIB was calculated for genes (both conserved and unique) within each COG category. The strains were then hierarchically clustered using average linkage with the Pearson product correlation coefficient measuring the distance between the vectors of mean CIB per COG category. The color bar ranges from green (low CIB, 0.0) to red (high CIB, 0.5).</p
<p>Phenotypes are on the <i>x</i>-axis and Pfam families are on the <i>y</i>-axis. Correlation is re...
(A) Visualization of the occurrence patterns of bacterial genera using the Fruchterman–Reingold forc...
<p>Gel-view figure of the intensity of 3,580 probes covered by MITChip and assigned to the phylogene...
<p>Genes with a significant change in expression level between the WT and the SPL20 strain during th...
<p>Each bin contains genes from <i>ℓ</i>-499 to <i>ℓ</i> bases in length, where <i>ℓ</i> can be read...
<p>: K-means clustering was used to group KO terms within each category. The cluster with highest oc...
<p>The fosmid clones within 0.04 of the Euclidean distances corresponding to the red line are evalua...
<p>Clustering was performed by using Spearman (columns) and Euclidean (rows) distance and average li...
<p>(A) Nearest neighbor “species” composing 20% or more of the microbiome in at least one sample are...
<p>Samples are shaded based on human microbiome habitat characteristics (black = gut/mouth, gray = m...
<p><i>Flavobacterium</i> strains functionally clustered into terrestrial and aquatic clades. The dis...
<p>Double hierarchical dendrogram shows the bacterial distribution. The bacterial phylogenetic tree ...
<p>Within each group, a fold change (C-DE/C-C, EE-DE/EE-C, and EE-DE/C-C) was calculated and log<sub...
<p>The analysis was performed using as attributes the production of cLPs grouped by the three famili...
<p>Letters (A–C) used to identify individual life stage replicates. Double hierarchical dendogram sh...
<p>Phenotypes are on the <i>x</i>-axis and Pfam families are on the <i>y</i>-axis. Correlation is re...
(A) Visualization of the occurrence patterns of bacterial genera using the Fruchterman–Reingold forc...
<p>Gel-view figure of the intensity of 3,580 probes covered by MITChip and assigned to the phylogene...
<p>Genes with a significant change in expression level between the WT and the SPL20 strain during th...
<p>Each bin contains genes from <i>ℓ</i>-499 to <i>ℓ</i> bases in length, where <i>ℓ</i> can be read...
<p>: K-means clustering was used to group KO terms within each category. The cluster with highest oc...
<p>The fosmid clones within 0.04 of the Euclidean distances corresponding to the red line are evalua...
<p>Clustering was performed by using Spearman (columns) and Euclidean (rows) distance and average li...
<p>(A) Nearest neighbor “species” composing 20% or more of the microbiome in at least one sample are...
<p>Samples are shaded based on human microbiome habitat characteristics (black = gut/mouth, gray = m...
<p><i>Flavobacterium</i> strains functionally clustered into terrestrial and aquatic clades. The dis...
<p>Double hierarchical dendrogram shows the bacterial distribution. The bacterial phylogenetic tree ...
<p>Within each group, a fold change (C-DE/C-C, EE-DE/EE-C, and EE-DE/C-C) was calculated and log<sub...
<p>The analysis was performed using as attributes the production of cLPs grouped by the three famili...
<p>Letters (A–C) used to identify individual life stage replicates. Double hierarchical dendogram sh...
<p>Phenotypes are on the <i>x</i>-axis and Pfam families are on the <i>y</i>-axis. Correlation is re...
(A) Visualization of the occurrence patterns of bacterial genera using the Fruchterman–Reingold forc...
<p>Gel-view figure of the intensity of 3,580 probes covered by MITChip and assigned to the phylogene...