MOESM1 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for efficient production of glucaric acid at high titer

Na Chen (153323)
Jingya Wang (3409949)
Yunying Zhao (5178305)
Yu Deng (162738)

May 2018

Additional file 1: Table S1. Primers used in this study. Figure S1. MIOX4 activity of the episomal e...

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for 7-dehydrocholesterol overproduction

Xiao-Jing Guo (198408)
Wen-Hai Xiao (758673)
Ying Wang (11406)
Ming-Dong Yao (5520707)
Bo-Xuan Zeng (5520704)
Hong Liu (50694)
Guang-Rong Zhao (1321809)
Ying-Jin Yuan (139604)

July 2018

Additional file 1: Table S1. Oligonucleotides used in this study. Table S2. The Codon-optimized sequ...

MOESM1 of High-titer production of 13R-manoyl oxide in metabolically engineered Saccharomyces cerevisiae

Chuanbo Zhang (5534360)
Haiyan Ju (6632957)
Chun-Zhe Lu (6632960)
Fanglong Zhao (5921486)
Jingjing Liu (305549)
Xiaoyan Guo (228186)
Yufen Wu (5921489)
Guang-Rong Zhao (1321809)
Wenyu Lu (5534363)

April 2019

Additional file 1: Table S1. Primers used in this study. Figure S1. Expression cassettes constructio...

MOESM4 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 4: Figure S2. GC/MS analysis of the reaction products obtained from in vitro reactio...

MOESM6 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 6: Figure S4. Relative ALP activity of strain EJ4 grown on different carbon sources,...

MOESM5 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 5: Figure S3. TLC analysis of the reaction products obtained from in vitro reactions...

Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Ju Yun
Eun Joong Oh
Jing-Jing Liu
Sora Yu
Dong Hyun Kim
Suryang Kwak
Kyoung Heon Kim
Yong-Su Jin

May 2018

Abstract Background Understanding the global metabolic network, significantly perturbed upon promisc...

MOESM1 of Heterologous phosphoketolase expression redirects flux towards acetate, perturbs sugar phosphate pools and increases respiratory demand in Saccharomyces cerevisiae

Alexandra Bergman (3465416)
John Hellgren (6289991)
Thomas Moritz (54137)
Verena Siewers (107753)
Jens Nielsen (10549)
Yun Chen (279569)

February 2019

Additional file 1: Table S1. Physiological parameters calculated for control and xfpk(BB) cultivated...

MOESM1 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

Tomokazu Shirai (76740)
Takashi Osanai (1654369)
Akihiko Kondo (163500)

January 2016

Additional file 1: Table S1. List of exogenous metabolic reactions linked to the SyGSM (metabolic re...

MOESM4 of Metabolome- and genome-scale model analyses for engineering of Aureobasidium pullulans to enhance polymalic acid and malic acid production from sugarcane molasses

Jun Feng (116162)
Jing Yang (13969)
Wenwen Yang (428612)
Jie Chen (5892)
Min Jiang (56794)
Xiang Zou (706903)

April 2018

Additional file 4: Table S3. The changes of differential metabolites in glucose- and sucrose-based f...

MOESM4 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

Tomokazu Shirai (76740)
Takashi Osanai (1654369)
Akihiko Kondo (163500)

January 2016

Additional file : Table S4. Total number of metabolic reactions added when building the SyHyMeP, and...

MOESM1 of Diversity of flux distribution in central carbon metabolism of S. cerevisiae strains from diverse environments

Thibault Nidelet (3240648)
Pascale Brial (205201)
Carole Camarasa (205193)
Sylvie Dequin (205208)

April 2016

Additional file 1. Table S1: Strains' origin and experimental data. Table S2: Modelâs metabolites ...

MOESM2 of An engineered cryptic Hxt11 sugar transporter facilitates glucoseâxylose co-consumption in Saccharomyces cerevisiae

Hyun Shin (1907425)
Jeroen Nijland (3456155)
Paul Waal (3456161)
RenĂŠ Jong (3562625)
Paul Klaassen (3456164)
Arnold Driessen (3456158)

November 2015

Additional file 2. Supplementary tables. Table S1. SNPs identified in the DS68625-evo strain by geno...

MOESM2 of An engineered cryptic Hxt11 sugar transporter facilitates glucoseâ xylose co-consumption in Saccharomyces cerevisiae

Shin, Hyun
Nijland, Jeroen
De Waal, Paul P.
De Jong, René M.
Klaassen, Paul
Driessen, Arnold J. M.
Molecular Microbiology
DSM Biotechnology Center

November 2015

Additional file 2. Supplementary tables. Table S1. SNPs identified in the DS68625-evo strain by geno...

MOESM4 of Metabolic engineering strategies for optimizing acetate reduction, ethanol yield and osmotolerance in Saccharomyces cerevisiae

Ioannis Papapetridis (3407951)
Marlous Dijk (3407957)
Antonius Maris (3407954)
Jack Pronk (3407960)

April 2017

Additional file 4. Plots of ln(OD660) values versus time in anaerobic bioreactor batch cultures of S...

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for efficient production of glucaric acid at high titer

Na Chen (153323)
Jingya Wang (3409949)
Yunying Zhao (5178305)
Yu Deng (162738)

May 2018

Additional file 1: Table S1. Primers used in this study. Figure S1. MIOX4 activity of the episomal e...

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for 7-dehydrocholesterol overproduction

Xiao-Jing Guo (198408)
Wen-Hai Xiao (758673)
Ying Wang (11406)
Ming-Dong Yao (5520707)
Bo-Xuan Zeng (5520704)
Hong Liu (50694)
Guang-Rong Zhao (1321809)
Ying-Jin Yuan (139604)

July 2018

Additional file 1: Table S1. Oligonucleotides used in this study. Table S2. The Codon-optimized sequ...

MOESM1 of High-titer production of 13R-manoyl oxide in metabolically engineered Saccharomyces cerevisiae

Chuanbo Zhang (5534360)
Haiyan Ju (6632957)
Chun-Zhe Lu (6632960)
Fanglong Zhao (5921486)
Jingjing Liu (305549)
Xiaoyan Guo (228186)
Yufen Wu (5921489)
Guang-Rong Zhao (1321809)
Wenyu Lu (5534363)

April 2019

Additional file 1: Table S1. Primers used in this study. Figure S1. Expression cassettes constructio...

MOESM4 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 4: Figure S2. GC/MS analysis of the reaction products obtained from in vitro reactio...

MOESM6 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 6: Figure S4. Relative ALP activity of strain EJ4 grown on different carbon sources,...

MOESM5 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Yun (5218118)
Eun Oh (5218124)
Jing-Jing Liu (108508)
Sora Yu (5218121)
Dong Kim (443919)
Suryang Kwak (3287214)
Kyoung Kim (1355361)
Yong-Su Jin (382510)

May 2018

Additional file 5: Figure S3. TLC analysis of the reaction products obtained from in vitro reactions...

Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Eun Ju Yun
Eun Joong Oh
Jing-Jing Liu
Sora Yu
Dong Hyun Kim
Suryang Kwak
Kyoung Heon Kim
Yong-Su Jin

May 2018

Abstract Background Understanding the global metabolic network, significantly perturbed upon promisc...

MOESM1 of Heterologous phosphoketolase expression redirects flux towards acetate, perturbs sugar phosphate pools and increases respiratory demand in Saccharomyces cerevisiae

Alexandra Bergman (3465416)
John Hellgren (6289991)
Thomas Moritz (54137)
Verena Siewers (107753)
Jens Nielsen (10549)
Yun Chen (279569)

February 2019

Additional file 1: Table S1. Physiological parameters calculated for control and xfpk(BB) cultivated...

MOESM1 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

Tomokazu Shirai (76740)
Takashi Osanai (1654369)
Akihiko Kondo (163500)

January 2016

Additional file 1: Table S1. List of exogenous metabolic reactions linked to the SyGSM (metabolic re...

MOESM4 of Metabolome- and genome-scale model analyses for engineering of Aureobasidium pullulans to enhance polymalic acid and malic acid production from sugarcane molasses

Jun Feng (116162)
Jing Yang (13969)
Wenwen Yang (428612)
Jie Chen (5892)
Min Jiang (56794)
Xiang Zou (706903)

April 2018

Additional file 4: Table S3. The changes of differential metabolites in glucose- and sucrose-based f...

MOESM4 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

Tomokazu Shirai (76740)
Takashi Osanai (1654369)
Akihiko Kondo (163500)

January 2016

Additional file : Table S4. Total number of metabolic reactions added when building the SyHyMeP, and...

MOESM1 of Diversity of flux distribution in central carbon metabolism of S. cerevisiae strains from diverse environments

Thibault Nidelet (3240648)
Pascale Brial (205201)
Carole Camarasa (205193)
Sylvie Dequin (205208)

April 2016

Additional file 1. Table S1: Strains' origin and experimental data. Table S2: Modelâs metabolites ...

MOESM2 of An engineered cryptic Hxt11 sugar transporter facilitates glucoseâxylose co-consumption in Saccharomyces cerevisiae

Hyun Shin (1907425)
Jeroen Nijland (3456155)
Paul Waal (3456161)
RenĂŠ Jong (3562625)
Paul Klaassen (3456164)
Arnold Driessen (3456158)

November 2015

Additional file 2. Supplementary tables. Table S1. SNPs identified in the DS68625-evo strain by geno...

MOESM2 of An engineered cryptic Hxt11 sugar transporter facilitates glucoseâ xylose co-consumption in Saccharomyces cerevisiae

Shin, Hyun
Nijland, Jeroen
De Waal, Paul P.
De Jong, René M.
Klaassen, Paul
Driessen, Arnold J. M.
Molecular Microbiology
DSM Biotechnology Center

November 2015

Additional file 2. Supplementary tables. Table S1. SNPs identified in the DS68625-evo strain by geno...

MOESM4 of Metabolic engineering strategies for optimizing acetate reduction, ethanol yield and osmotolerance in Saccharomyces cerevisiae

Ioannis Papapetridis (3407951)
Marlous Dijk (3407957)
Antonius Maris (3407954)
Jack Pronk (3407960)

April 2017

Additional file 4. Plots of ln(OD660) values versus time in anaerobic bioreactor batch cultures of S...

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for efficient production of glucaric acid at high titer

Na Chen (153323)
Jingya Wang (3409949)
Yunying Zhao (5178305)
Yu Deng (162738)

May 2018

Additional file 1: Table S1. Primers used in this study. Figure S1. MIOX4 activity of the episomal e...

MOESM1 of Metabolic engineering of Saccharomyces cerevisiae for 7-dehydrocholesterol overproduction

Xiao-Jing Guo (198408)
Wen-Hai Xiao (758673)
Ying Wang (11406)
Ming-Dong Yao (5520707)
Bo-Xuan Zeng (5520704)
Hong Liu (50694)
Guang-Rong Zhao (1321809)
Ying-Jin Yuan (139604)

July 2018

Additional file 1: Table S1. Oligonucleotides used in this study. Table S2. The Codon-optimized sequ...

MOESM1 of High-titer production of 13R-manoyl oxide in metabolically engineered Saccharomyces cerevisiae

Chuanbo Zhang (5534360)
Haiyan Ju (6632957)
Chun-Zhe Lu (6632960)
Fanglong Zhao (5921486)
Jingjing Liu (305549)
Xiaoyan Guo (228186)
Yufen Wu (5921489)
Guang-Rong Zhao (1321809)
Wenyu Lu (5534363)

April 2019

Additional file 1: Table S1. Primers used in this study. Figure S1. Expression cassettes constructio...

MOESM1 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Abstract

Extracted data

MOESM1 of Promiscuous activities of heterologous enzymes lead to unintended metabolic rerouting in Saccharomyces cerevisiae engineered to assimilate various sugars from renewable biomass

Abstract

Extracted data

Related items

Related items