Table S1. One-sample Wilcoxon tests of errors in rate estimates obtained using TempEst, LSD, and BEAST. Significant results are indicated in bold font. Table S2. Mann-Whitney-Wilcoxon pairwise comparisons between standardized errors in rate estimates obtained using TempEst. Rows and columns correspond to the 12 simulation scenarios. Significant results are indicated in bold font. Table S3. Mann-Whitney-Wilcoxon pairwise comparisons between standardized errors in rate estimates obtained using LSD. Rows and columns correspond to the 12 simulation scenarios. Significant results are indicated in bold font. Table S4. Mann-Whitney-Wilcoxon pairwise comparisons between standardized errors in rate estimates obtained using BEAST. Rows and columns co...
Table S1. Number of genomes left in the reference databases and training sets of the methods used in...
Comparison of the metrics of sequence yield and quality of 18-h and 26-h WGS (HiSeq 2500 2 × 100 nt ...
Tests for deviations from Hardy-Weinberg equilibrium. Supplementary text 1.1: Simulation methods. Su...
Figure S5. Relationships between phylogenetic stemminess and error in rate estimates using least-squ...
Figure S6. Relationships between phylogenetic stemminess and error in median posterior estimates usi...
Table S1. Summary of bacterial sequences. Table S2. Summary of S. cerevisiae sequences. Table S3. Su...
Performance of 4 normalisation methods and 2 transcript abundance estimation procedures on the TOIL ...
Table S2. Bilinear multiple correlation coefficient of sequence variations and structure changes wit...
Table S1. Number of high-quality biallelic variants in GENOME, EXOME, BEADCHIP, and HUN-EXOM dataset...
The number of non-synonymous mutations in coding regions in the evolved clones for each experimental...
Odds Table of Epistasis Model 1. Table S2 Odds Table of Epistasis Model 2. Table S3. Odds Table of E...
Table S3. The calculated FST and FST difference data used for analyses. FST matrix of populations ba...
Figure S1. The distribution of match rates of control probes between and within individuals. Figure ...
The 10-taxon tree used in simulation 1c that was obtained by dividing each terminal taxon of the 5-t...
Figure S1. Distribution of differential levels of average introgression between the five northern an...
Table S1. Number of genomes left in the reference databases and training sets of the methods used in...
Comparison of the metrics of sequence yield and quality of 18-h and 26-h WGS (HiSeq 2500 2 × 100 nt ...
Tests for deviations from Hardy-Weinberg equilibrium. Supplementary text 1.1: Simulation methods. Su...
Figure S5. Relationships between phylogenetic stemminess and error in rate estimates using least-squ...
Figure S6. Relationships between phylogenetic stemminess and error in median posterior estimates usi...
Table S1. Summary of bacterial sequences. Table S2. Summary of S. cerevisiae sequences. Table S3. Su...
Performance of 4 normalisation methods and 2 transcript abundance estimation procedures on the TOIL ...
Table S2. Bilinear multiple correlation coefficient of sequence variations and structure changes wit...
Table S1. Number of high-quality biallelic variants in GENOME, EXOME, BEADCHIP, and HUN-EXOM dataset...
The number of non-synonymous mutations in coding regions in the evolved clones for each experimental...
Odds Table of Epistasis Model 1. Table S2 Odds Table of Epistasis Model 2. Table S3. Odds Table of E...
Table S3. The calculated FST and FST difference data used for analyses. FST matrix of populations ba...
Figure S1. The distribution of match rates of control probes between and within individuals. Figure ...
The 10-taxon tree used in simulation 1c that was obtained by dividing each terminal taxon of the 5-t...
Figure S1. Distribution of differential levels of average introgression between the five northern an...
Table S1. Number of genomes left in the reference databases and training sets of the methods used in...
Comparison of the metrics of sequence yield and quality of 18-h and 26-h WGS (HiSeq 2500 2 × 100 nt ...
Tests for deviations from Hardy-Weinberg equilibrium. Supplementary text 1.1: Simulation methods. Su...