Additional file 1: of Dynamics of colistin and tobramycin resistance among Enterobacter cloacae during prolonged use of selective decontamination of the digestive tract

Additional file 2: of Carriage of antibiotic-resistant Gram-negative bacteria after discontinuation of selective decontamination of the digestive tract (SDD) or selective oropharyngeal decontamination (SOD)

E. de Jonge (5803475)
R. de Wilde (5803478)
N. Juffermans (5803481)
E. Oostdijk (5803484)
A. Bernards (5803487)
E. van Essen (5803490)
E. Kuijper (3787813)
C. Visser (3587264)
J. Kesecioglu (5803493)
M. Bonten (5258543)

September 2018

Table S2. Analysis in which intrinsically resistant bacteria are also included. Rectal colonization ...

Additional file 3: of Ciprofloxacin resistance in community- and hospital-acquired Escherichia coli urinary tract infections: a systematic review and meta-analysis of observational studies

Oyebola Fasugba (3202038)
Anne Gardner (3202035)
Brett Mitchell (3416651)
George Mnatzaganian (447529)

November 2015

Subgroup analyses of pooled ciprofloxacin resistance by setting. Results of subgroup analyses compar...

Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii

Boinett, Christine J.
Cain, Amy K.
Hawkey, Jane
Do Hoang, Nhu Tran
Khanh, Nhu Nguyen Thi
Thanh, Duy Pham
Dordel, Janina
Campbell, James I.
Lan, Nguyen Phu Huong
Mayho, Matthew
Langridge, Gemma C.
Hadfield, James
Chau, Nguyen Van Vinh
Thwaites, Guy E.
Parkhill, Julian
Thomson, Nicholas R.
Holt, Kathryn E.
Baker, Stephen

February 2019

Supplementary data for: "Clinical and laboratory-induced colistin-resistance mechanisms in Acinetoba...

Dynamics of colistin and tobramycin resistance among Enterobacter cloacae during prolonged use of selective decontamination of the digestive tract

Dautzenberg, M. J. D.
Bayjanov, J. R.
Leverstein-van Hall, M. A.
Muller, A. E.
Gelinck, L. B. S.
Jansen, C. L.
Leyten, E. M. S.
Ruys, T.
Scharringa, J.
van der Starre, R. E.
Fluit, A. C.
Bonten, M. J. M.

May 2018

Background A high prevalence of colistin resistance among E. cloacae isolates in two intensive care ...

Additional file 1: of Enterobacteriaceae are essential for the modulation of colitis severity by fungi

Bruno Sovran (4430119)
Julien Planchais (186653)
Sarah Jegou (5709266)
Marjolene Straube (4807908)
Bruno Lamas (111706)
Jane Natividad (5709269)
Allison Agus (389049)
Louise Dupraz (5709272)
JĂŠrĂŠmy Glodt (5709275)
GrĂŠgory Da Costa (5709278)
Marie-Laure Michel (209370)
Philippe Langella (78457)
Mathias Richard (5709281)
Harry Sokol (548882)

September 2018

Figure S1. Broad-spectrum antibiotics disrupt microbiota with selection of Enterobacteriaceae. Figur...

Additional file 1: of Fecal carriage of multidrug-resistant Escherichia coli by community children in southern Taiwan

I-Fei Huang (656474)
Wei-Yang Lee (5401148)
Jiun-Ling Wang (304072)
Chih-Hsin Hung (304076)
Hong-Hsiang Hu (5401145)
Wan-Yu Hung (5401151)
Yun-Ju Hung (5401154)
Wen-Chi Chen (286343)
Ying-Tso Shen (5401157)
Ming-Fang Cheng (3462056)

June 2018

Table S1. Minimal inhibitory concentration breakpoints for Enterobacteriaceae. (DOCX 16 kb

Additional file 1: Table S1. of Strain-specific transmission in an outbreak of ESBL-producing Enterobacteriaceae in the hemato-oncology care unit: a cohort study

Makiko Uemura (3619295)
Osamu Imataki (188246)
Shumpei Uchida (3619292)
Haruyuki Nakayama-Imaohji (103052)
Yukiko Ohue (3619283)
Harumi Matsuka (3619286)
Hatsune Mori (3619298)
Hiroaki Dobashi (3619289)
Tomomi Kuwahara (103062)
Norimitsu Kadowaki (510500)

January 2017

Antibiogram of extended-spectrum β-lactamase-producing Enterobacteriaceae. The susceptibility of eac...

Additional file 5: Table S1. of Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

Mihai Pop (48593)
Joseph Paulson (3495965)
Subhra Chakraborty (464461)
Irina Astrovskaya (3508328)
Brianna Lindsay (3508319)
Shan Li (110392)
HĂŠctor Bravo (3413552)
Clayton Harro (2552539)
Julian Parkhill (30393)
Alan Walker (3508322)
Richard Walker (3126456)
David Sack (148746)
O. Stine (3508325)

June 2016

Quantitative measurements of E. coli presence in the samples (quantitative culture, qPCR, 16S rRNA g...

Emergence of Colistin Resistance in Enterobacteriaceae after the Introduction of Selective Digestive Tract Decontamination in an Intensive Care Unit

Halaby, Teysir
al Naiemi, Nashwan
Kluytmans, Jan
van der Palen, Jacobus Adrianus Maria
Vandenbroucke-Grauls, Christina M.J.E.

April 2013

Selective decontamination of the digestive tract (SDD) selectively eradicates aerobic Gram-negative ...

MOESM1 of Chlortetracycline and florfenicol induce expression of genes associated with pathogenicity in multidrug-resistant Salmonella enterica serovar Typhimurium

Devin Holman (3855493)
Shawn Bearson (3468278)
Bradley Bearson (4910140)
Brian Brunelle (4910137)

March 2018

Additional file 1: Table S1. Minimum inhibitory concentrations for each MDR S. Typhimurium strain fo...

Additional file 4: of Carriage of antibiotic-resistant Gram-negative bacteria after discontinuation of selective decontamination of the digestive tract (SDD) or selective oropharyngeal decontamination (SOD)

E. de Jonge (5803475)
R. de Wilde (5803478)
N. Juffermans (5803481)
E. Oostdijk (5803484)
A. Bernards (5803487)
E. van Essen (5803490)
E. Kuijper (3787813)
C. Visser (3587264)
J. Kesecioglu (5803493)
M. Bonten (5258543)

September 2018

Figure S2-S8. Time to first rectal colonization after ICU discharge with Gram-negative bacteria resi...

DataSheet_2_A comprehensive description of the TolC effect on the antimicrobial susceptibility profile in Enterobacter bugandensis.pdf

Bingyu Li (279797)
Ji Zhang (70438)
Xiaodong Li (181281)

December 2022

BackgroundEnterobacter bugandensis is an emerging human pathogen in which multidrug resistant strain...

DataSheet_1_A comprehensive description of the TolC effect on the antimicrobial susceptibility profile in Enterobacter bugandensis.pdf

Bingyu Li (279797)
Ji Zhang (70438)
Xiaodong Li (181281)

December 2022

BackgroundEnterobacter bugandensis is an emerging human pathogen in which multidrug resistant strain...

Additional file 1: of Evaluation of co-transfer of plasmid-mediated fluoroquinolone resistance genes and blaNDM gene in Enterobacteriaceae causing neonatal septicaemia

Shravani Mitra (6409403)
Suchandra Mukherjee (6409406)
Sharmi Naha (6409409)
Pinaki Chattopadhyay (6409412)
Shanta Dutta (185742)
Sulagna Basu (663199)

March 2019

Detailed information of allÂ studied EnterobacteriaceaeÂ :Â MIC values of meropenem and cirpfloxacin...

Additional file 2: of Ciprofloxacin resistance in community- and hospital-acquired Escherichia coli urinary tract infections: a systematic review and meta-analysis of observational studies

Oyebola Fasugba (3202038)
Anne Gardner (3202035)
Brett Mitchell (3416651)
George Mnatzaganian (447529)

November 2015

Subgroup analyses of pooled ciprofloxacin resistance in hospital setting. Results of subgroup analys...

Additional file 2: of Carriage of antibiotic-resistant Gram-negative bacteria after discontinuation of selective decontamination of the digestive tract (SDD) or selective oropharyngeal decontamination (SOD)

E. de Jonge (5803475)
R. de Wilde (5803478)
N. Juffermans (5803481)
E. Oostdijk (5803484)
A. Bernards (5803487)
E. van Essen (5803490)
E. Kuijper (3787813)
C. Visser (3587264)
J. Kesecioglu (5803493)
M. Bonten (5258543)

September 2018

Table S2. Analysis in which intrinsically resistant bacteria are also included. Rectal colonization ...

Additional file 3: of Ciprofloxacin resistance in community- and hospital-acquired Escherichia coli urinary tract infections: a systematic review and meta-analysis of observational studies

Oyebola Fasugba (3202038)
Anne Gardner (3202035)
Brett Mitchell (3416651)
George Mnatzaganian (447529)

November 2015

Subgroup analyses of pooled ciprofloxacin resistance by setting. Results of subgroup analyses compar...

Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii

Boinett, Christine J.
Cain, Amy K.
Hawkey, Jane
Do Hoang, Nhu Tran
Khanh, Nhu Nguyen Thi
Thanh, Duy Pham
Dordel, Janina
Campbell, James I.
Lan, Nguyen Phu Huong
Mayho, Matthew
Langridge, Gemma C.
Hadfield, James
Chau, Nguyen Van Vinh
Thwaites, Guy E.
Parkhill, Julian
Thomson, Nicholas R.
Holt, Kathryn E.
Baker, Stephen

February 2019

Supplementary data for: "Clinical and laboratory-induced colistin-resistance mechanisms in Acinetoba...

Dynamics of colistin and tobramycin resistance among Enterobacter cloacae during prolonged use of selective decontamination of the digestive tract

Dautzenberg, M. J. D.
Bayjanov, J. R.
Leverstein-van Hall, M. A.
Muller, A. E.
Gelinck, L. B. S.
Jansen, C. L.
Leyten, E. M. S.
Ruys, T.
Scharringa, J.
van der Starre, R. E.
Fluit, A. C.
Bonten, M. J. M.

May 2018

Background A high prevalence of colistin resistance among E. cloacae isolates in two intensive care ...

Additional file 1: of Enterobacteriaceae are essential for the modulation of colitis severity by fungi

Bruno Sovran (4430119)
Julien Planchais (186653)
Sarah Jegou (5709266)
Marjolene Straube (4807908)
Bruno Lamas (111706)
Jane Natividad (5709269)
Allison Agus (389049)
Louise Dupraz (5709272)
JĂŠrĂŠmy Glodt (5709275)
GrĂŠgory Da Costa (5709278)
Marie-Laure Michel (209370)
Philippe Langella (78457)
Mathias Richard (5709281)
Harry Sokol (548882)

September 2018

Figure S1. Broad-spectrum antibiotics disrupt microbiota with selection of Enterobacteriaceae. Figur...

Additional file 1: of Fecal carriage of multidrug-resistant Escherichia coli by community children in southern Taiwan

I-Fei Huang (656474)
Wei-Yang Lee (5401148)
Jiun-Ling Wang (304072)
Chih-Hsin Hung (304076)
Hong-Hsiang Hu (5401145)
Wan-Yu Hung (5401151)
Yun-Ju Hung (5401154)
Wen-Chi Chen (286343)
Ying-Tso Shen (5401157)
Ming-Fang Cheng (3462056)

June 2018

Table S1. Minimal inhibitory concentration breakpoints for Enterobacteriaceae. (DOCX 16 kb

Additional file 1: Table S1. of Strain-specific transmission in an outbreak of ESBL-producing Enterobacteriaceae in the hemato-oncology care unit: a cohort study

Makiko Uemura (3619295)
Osamu Imataki (188246)
Shumpei Uchida (3619292)
Haruyuki Nakayama-Imaohji (103052)
Yukiko Ohue (3619283)
Harumi Matsuka (3619286)
Hatsune Mori (3619298)
Hiroaki Dobashi (3619289)
Tomomi Kuwahara (103062)
Norimitsu Kadowaki (510500)

January 2017

Antibiogram of extended-spectrum β-lactamase-producing Enterobacteriaceae. The susceptibility of eac...

Additional file 5: Table S1. of Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

Mihai Pop (48593)
Joseph Paulson (3495965)
Subhra Chakraborty (464461)
Irina Astrovskaya (3508328)
Brianna Lindsay (3508319)
Shan Li (110392)
HĂŠctor Bravo (3413552)
Clayton Harro (2552539)
Julian Parkhill (30393)
Alan Walker (3508322)
Richard Walker (3126456)
David Sack (148746)
O. Stine (3508325)

June 2016

Quantitative measurements of E. coli presence in the samples (quantitative culture, qPCR, 16S rRNA g...

Emergence of Colistin Resistance in Enterobacteriaceae after the Introduction of Selective Digestive Tract Decontamination in an Intensive Care Unit

Halaby, Teysir
al Naiemi, Nashwan
Kluytmans, Jan
van der Palen, Jacobus Adrianus Maria
Vandenbroucke-Grauls, Christina M.J.E.

April 2013

Selective decontamination of the digestive tract (SDD) selectively eradicates aerobic Gram-negative ...

MOESM1 of Chlortetracycline and florfenicol induce expression of genes associated with pathogenicity in multidrug-resistant Salmonella enterica serovar Typhimurium

Devin Holman (3855493)
Shawn Bearson (3468278)
Bradley Bearson (4910140)
Brian Brunelle (4910137)

March 2018

Additional file 1: Table S1. Minimum inhibitory concentrations for each MDR S. Typhimurium strain fo...

Additional file 4: of Carriage of antibiotic-resistant Gram-negative bacteria after discontinuation of selective decontamination of the digestive tract (SDD) or selective oropharyngeal decontamination (SOD)

E. de Jonge (5803475)
R. de Wilde (5803478)
N. Juffermans (5803481)
E. Oostdijk (5803484)
A. Bernards (5803487)
E. van Essen (5803490)
E. Kuijper (3787813)
C. Visser (3587264)
J. Kesecioglu (5803493)
M. Bonten (5258543)

September 2018

Figure S2-S8. Time to first rectal colonization after ICU discharge with Gram-negative bacteria resi...

DataSheet_2_A comprehensive description of the TolC effect on the antimicrobial susceptibility profile in Enterobacter bugandensis.pdf

Bingyu Li (279797)
Ji Zhang (70438)
Xiaodong Li (181281)

December 2022

BackgroundEnterobacter bugandensis is an emerging human pathogen in which multidrug resistant strain...

DataSheet_1_A comprehensive description of the TolC effect on the antimicrobial susceptibility profile in Enterobacter bugandensis.pdf

Bingyu Li (279797)
Ji Zhang (70438)
Xiaodong Li (181281)

December 2022

BackgroundEnterobacter bugandensis is an emerging human pathogen in which multidrug resistant strain...

Additional file 1: of Evaluation of co-transfer of plasmid-mediated fluoroquinolone resistance genes and blaNDM gene in Enterobacteriaceae causing neonatal septicaemia

Shravani Mitra (6409403)
Suchandra Mukherjee (6409406)
Sharmi Naha (6409409)
Pinaki Chattopadhyay (6409412)
Shanta Dutta (185742)
Sulagna Basu (663199)

March 2019

Detailed information of allÂ studied EnterobacteriaceaeÂ :Â MIC values of meropenem and cirpfloxacin...

Additional file 2: of Ciprofloxacin resistance in community- and hospital-acquired Escherichia coli urinary tract infections: a systematic review and meta-analysis of observational studies

Oyebola Fasugba (3202038)
Anne Gardner (3202035)
Brett Mitchell (3416651)
George Mnatzaganian (447529)

November 2015

Subgroup analyses of pooled ciprofloxacin resistance in hospital setting. Results of subgroup analys...

Additional file 2: of Carriage of antibiotic-resistant Gram-negative bacteria after discontinuation of selective decontamination of the digestive tract (SDD) or selective oropharyngeal decontamination (SOD)

E. de Jonge (5803475)
R. de Wilde (5803478)
N. Juffermans (5803481)
E. Oostdijk (5803484)
A. Bernards (5803487)
E. van Essen (5803490)
E. Kuijper (3787813)
C. Visser (3587264)
J. Kesecioglu (5803493)
M. Bonten (5258543)

September 2018

Table S2. Analysis in which intrinsically resistant bacteria are also included. Rectal colonization ...

Additional file 3: of Ciprofloxacin resistance in community- and hospital-acquired Escherichia coli urinary tract infections: a systematic review and meta-analysis of observational studies

Oyebola Fasugba (3202038)
Anne Gardner (3202035)
Brett Mitchell (3416651)
George Mnatzaganian (447529)

November 2015

Subgroup analyses of pooled ciprofloxacin resistance by setting. Results of subgroup analyses compar...

Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii

Boinett, Christine J.
Cain, Amy K.
Hawkey, Jane
Do Hoang, Nhu Tran
Khanh, Nhu Nguyen Thi
Thanh, Duy Pham
Dordel, Janina
Campbell, James I.
Lan, Nguyen Phu Huong
Mayho, Matthew
Langridge, Gemma C.
Hadfield, James
Chau, Nguyen Van Vinh
Thwaites, Guy E.
Parkhill, Julian
Thomson, Nicholas R.
Holt, Kathryn E.
Baker, Stephen

February 2019

Supplementary data for: "Clinical and laboratory-induced colistin-resistance mechanisms in Acinetoba...

Additional file 1: of Dynamics of colistin and tobramycin resistance among Enterobacter cloacae during prolonged use of selective decontamination of the digestive tract

Abstract

Extracted data

Additional file 1: of Dynamics of colistin and tobramycin resistance among Enterobacter cloacae during prolonged use of selective decontamination of the digestive tract

Abstract

Extracted data

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