Additional file 5: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Additional file 18: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Functional categories overrepresented among genes under positive selection in M. micrantha. Signific...

Additional file 8: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

GO terms significantly enriched in M. micrantha compared with both M. cordata and M. cordifolia. Sig...

Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo
Ying Liu
Wei Lun Ng
Pei-Chun Liao
Bing-Hong Huang
Weixi Li
Chunmei Li
Xianggang Shi
Yelin Huang

May 2018

Abstract Background Mikania micrantha H.B.K. (Asteraceae) is one of the world’s most invasive weeds ...

Additional file 4: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Downloaded nucleotide sequences from public databases and their alignment statistics. (PDF 117Â kb

Additional file 1: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Top-hit species categories of the non-redundant sequences of M. micrantha, M. cordata, and M. cordif...

Additional file 16: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Distribution of branch-specific Ka/Ks for M. micrantha, M. cordata, and M. cordifolia. (PDF 41Â kb

Additional file 17: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Positively selected genes identified in (a) M. micrantha, (b) M. cordata, and (c) M. cordifolia. (XL...

Additional file 3: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Assessment of per-base sequence accuracy of M. micrantha, M. cordata, and M. cordifolia unigenes. (a...

Additional file 2: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Length (a) and GC (b) distributions of the assembled unigenes of M. micrantha, M. cordata, and M. co...

Additional file 11: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Number of differentially expressed genes (DEGs) under different dispersion values. (PDF 49Â kb

Additional file 12: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

List of genes that were up- and down-regulated in M. micrantha compared with both M. cordata and M. ...

Additional file 13: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

GO categories over-represented in the list of up-regulated genes in M. micrantha. (XLSX 46Â kb

Additional file 10: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

KOG classification for M. micrantha, M. cordata, and M. cordifolia unigenes. A total of 11,127, 11,4...

Additional file 14: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Top 10% GO categories displaying the highest Ka/Ks ratios between two species. (a) M. micrantha-M. c...

Additional file 9: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

KEGG pathways with genes significantly differed between two species. (a) M. micrantha-M. cordata. (b...

Additional file 18: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Functional categories overrepresented among genes under positive selection in M. micrantha. Signific...

Additional file 8: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

GO terms significantly enriched in M. micrantha compared with both M. cordata and M. cordifolia. Sig...

Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo
Ying Liu
Wei Lun Ng
Pei-Chun Liao
Bing-Hong Huang
Weixi Li
Chunmei Li
Xianggang Shi
Yelin Huang

May 2018

Abstract Background Mikania micrantha H.B.K. (Asteraceae) is one of the world’s most invasive weeds ...

Additional file 4: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Downloaded nucleotide sequences from public databases and their alignment statistics. (PDF 117Â kb

Additional file 1: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Top-hit species categories of the non-redundant sequences of M. micrantha, M. cordata, and M. cordif...

Additional file 16: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Distribution of branch-specific Ka/Ks for M. micrantha, M. cordata, and M. cordifolia. (PDF 41Â kb

Additional file 17: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Positively selected genes identified in (a) M. micrantha, (b) M. cordata, and (c) M. cordifolia. (XL...

Additional file 3: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Assessment of per-base sequence accuracy of M. micrantha, M. cordata, and M. cordifolia unigenes. (a...

Additional file 2: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Length (a) and GC (b) distributions of the assembled unigenes of M. micrantha, M. cordata, and M. co...

Additional file 11: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Number of differentially expressed genes (DEGs) under different dispersion values. (PDF 49Â kb

Additional file 12: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

List of genes that were up- and down-regulated in M. micrantha compared with both M. cordata and M. ...

Additional file 13: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

GO categories over-represented in the list of up-regulated genes in M. micrantha. (XLSX 46Â kb

Additional file 10: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

KOG classification for M. micrantha, M. cordata, and M. cordifolia unigenes. A total of 11,127, 11,4...

Additional file 14: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Top 10% GO categories displaying the highest Ka/Ks ratios between two species. (a) M. micrantha-M. c...

Additional file 9: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

KEGG pathways with genes significantly differed between two species. (a) M. micrantha-M. cordata. (b...

Additional file 18: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

Functional categories overrepresented among genes under positive selection in M. micrantha. Signific...

Additional file 8: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo (838796)
Ying Liu (18461)
Wei Ng (4638088)
Pei-Chun Liao (114880)
Bing-Hong Huang (114879)
Weixi Li (22120)
Chunmei Li (272241)
Xianggang Shi (5279873)
Yelin Huang (166478)

May 2018

GO terms significantly enriched in M. micrantha compared with both M. cordata and M. cordifolia. Sig...

Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Wuxia Guo
Ying Liu
Wei Lun Ng
Pei-Chun Liao
Bing-Hong Huang
Weixi Li
Chunmei Li
Xianggang Shi
Yelin Huang

May 2018

Abstract Background Mikania micrantha H.B.K. (Asteraceae) is one of the world’s most invasive weeds ...

Additional file 5: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Abstract

Extracted data

Additional file 5: of Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion

Abstract

Extracted data

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