Additional file 3: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Additional file 1: of A genome wide survey reveals multiple nematocyst-specific genes in Myxozoa

Erez Shpirer (5744009)
Arik Diamant (5744012)
Paulyn Cartwright (48426)
DorothĂŠe Huchon (3464153)

September 2018

Complete ML phylogenetic tree reconstructed using the NSP6 dataset. ML bootstrap (BPML)/Bayesian pos...

Betancur-R., Ricardo
Li, Chenhong
Munroe, Thomas A.
Ballesteros, Jesus A.
Ortí, Guillermo

June 2013

Supplementary Figure 2. Four representative multi-locus phylogenies based on the subset. Color branc...

Figure 2 in Do mismatched genitalia promote mechanical isolation in syntopic species of Phalloceros fishes (Poeciliidae)?

Jennings, W. Bryan
Souto-Santos, Igor C.A.
Buckup, Paulo A.
Zandonà, Eugenia

June 2023

Figure 2. Bayesian mitochondrial (mtDNA) and nuclear (nDNA) gene trees, showing the inferred relatio...

Additional file 2: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Wei Shi (68167)
Shixi Chen (67760)
Xiaoyu Kong (5290706)
Lizhen Si (5290709)
Li Gong (205336)
Yanchun Zhang (556475)
Hui Yu (27723)

May 2018

Figure S1. a Relationships of Carangimorphariae taxa inferred from the Bayesian analysis v3.2 of the...

Additional file 1: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Wei Shi (68167)
Shixi Chen (67760)
Xiaoyu Kong (5290706)
Lizhen Si (5290709)
Li Gong (205336)
Yanchun Zhang (556475)
Hui Yu (27723)

May 2018

Table S1. Primers used to amplify fragments of the Psettodes erumei, Samaris cristatus, Achirus line...

Additional file 1: of Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye

Richard Harrington (499440)
Brant Faircloth (3250557)
Ron Eytan (3575135)
W. Smith (3575132)
Thomas Near (3575129)
Michael Alfaro (762174)
Matt Friedman (453708)

October 2016

Extended descriptions of protocols for DNA isolation, library preparation, sequencing, and data pipe...

Data from: Molecular evidence for the monophyly of flatfishes (Carangimorpharia: Pleuronectiformes)

Betancur-R., Ricardo
Ortí, Guillermo

January 2015

Proliferation of phylogenetic studies based on poor taxonomic sampling or insufficient molecular evi...

(A) Phylogenetic tree for 11 bothids with two other flatfishes as outgroup using the 12RT dataset. The phylogenetic tree was reconstructed by maximum likelihood and Bayesian methods. The first number beside the internal branch indicates Bayesian posterior probability, the second one is the bootstrap value. (B) Gene orders of fragments between tRNA-T and tRNA-F from 11 bothid species.

Dong-He Li (779158)
Wei Shi (68167)
Thomas A. Munroe (779159)
Li Gong (205336)
Xiao-Yu Kong (779160)

August 2015

<p>Cross-hatched area in bold indicates the core region of duplicate CRs. Light-gray box indicates t...

Data from: Are flatfishes (Pleuronectiformes) monophyletic?

Campbell, Matthew A.
Chen, Wei-Jen
López, J. Andrés

August 2013

All extant species of flatfish (order Pleuronectiformes) are thought to descend from a common ancest...

Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Shi, W
Chen, SX
Kong, XY
Si, LZ
Gong, L
Zhang, YC
Yu, H

January 2018

Background: The monophyly of flatfishes has not been supported in many molecular phylogenetic studie...

FIGURE 3 in Monogenea on exotic Indian freshwater fish. 5. First report of pathogenic Gussevia asota (Platyhelminths) from Oscar Astronotus ocellatus (Agassiz 1831) (Perciformes: Cichlidae)

Tripathi, Amit
Matey, Chawan

January 2023

FIGURE 3. Phylogenetic tree inferred from ML method based on partial 28S rDNA gene sequences of Guss...

Additional file 1: of Phylogeny, expression patterns and regulation of DNA Methyltransferases in early development of the flatfish, Solea senegalensis

Joana Firmino (4254184)
Carlos Carballo (4254190)
Paula Armesto (4254181)
Marco Campinho (4254187)
Deborah Power (3406547)
Manuel Manchado (33092)

July 2017

Sequence information used for phylogenetic analysis. The species, accession numbers (EnsemblâĄ, NCB...

Additional file 4: of Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits

Ehsan Kayal (2813773)
Bastian Bentlage (2819485)
M. Sabrina Pankey (372836)
Aki Ohdera (5167883)
Monica Medina (4371226)
David Plachetzki (3443294)
Allen Collins (270694)
Joseph Ryan (2500639)

April 2018

Exploratory phylogenetic estimation of the 47 AG_62tx partitions that had greater than three myxozoa...

Additional file 2: of Unique nucleolar dominance patterns in distant hybrid lineage derived from Megalobrama Amblycephala × Culter Alburnus

Jun Xiao (179459)
Fangzhou Hu (3483695)
Kaikun Luo (3483698)
Wuhui Li (3483701)
Shaojun Liu (282495)

December 2016

The peak figures of the PCR products sequencing. A, The sequencing peak figures of the PCR products ...

GENETICS/2019/301974

Yongyi Shen (6270632)

January 2019

Supplementary Figure 1: Phylogeny of Anguilliformes used for the detection of positive selection. De...

Additional file 1: of A genome wide survey reveals multiple nematocyst-specific genes in Myxozoa

Erez Shpirer (5744009)
Arik Diamant (5744012)
Paulyn Cartwright (48426)
DorothĂŠe Huchon (3464153)

September 2018

Complete ML phylogenetic tree reconstructed using the NSP6 dataset. ML bootstrap (BPML)/Bayesian pos...

FIG_SUP_2_Subset_trees

Betancur-R., Ricardo
Li, Chenhong
Munroe, Thomas A.
Ballesteros, Jesus A.
Ortí, Guillermo

June 2013

Supplementary Figure 2. Four representative multi-locus phylogenies based on the subset. Color branc...

Figure 2 in Do mismatched genitalia promote mechanical isolation in syntopic species of Phalloceros fishes (Poeciliidae)?

Jennings, W. Bryan
Souto-Santos, Igor C.A.
Buckup, Paulo A.
Zandonà, Eugenia

June 2023

Figure 2. Bayesian mitochondrial (mtDNA) and nuclear (nDNA) gene trees, showing the inferred relatio...

Additional file 2: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Wei Shi (68167)
Shixi Chen (67760)
Xiaoyu Kong (5290706)
Lizhen Si (5290709)
Li Gong (205336)
Yanchun Zhang (556475)
Hui Yu (27723)

May 2018

Figure S1. a Relationships of Carangimorphariae taxa inferred from the Bayesian analysis v3.2 of the...

Additional file 1: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Wei Shi (68167)
Shixi Chen (67760)
Xiaoyu Kong (5290706)
Lizhen Si (5290709)
Li Gong (205336)
Yanchun Zhang (556475)
Hui Yu (27723)

May 2018

Table S1. Primers used to amplify fragments of the Psettodes erumei, Samaris cristatus, Achirus line...

Additional file 1: of Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye

Richard Harrington (499440)
Brant Faircloth (3250557)
Ron Eytan (3575135)
W. Smith (3575132)
Thomas Near (3575129)
Michael Alfaro (762174)
Matt Friedman (453708)

October 2016

Extended descriptions of protocols for DNA isolation, library preparation, sequencing, and data pipe...

Data from: Molecular evidence for the monophyly of flatfishes (Carangimorpharia: Pleuronectiformes)

Betancur-R., Ricardo
Ortí, Guillermo

January 2015

Proliferation of phylogenetic studies based on poor taxonomic sampling or insufficient molecular evi...

(A) Phylogenetic tree for 11 bothids with two other flatfishes as outgroup using the 12RT dataset. The phylogenetic tree was reconstructed by maximum likelihood and Bayesian methods. The first number beside the internal branch indicates Bayesian posterior probability, the second one is the bootstrap value. (B) Gene orders of fragments between tRNA-T and tRNA-F from 11 bothid species.

Dong-He Li (779158)
Wei Shi (68167)
Thomas A. Munroe (779159)
Li Gong (205336)
Xiao-Yu Kong (779160)

August 2015

<p>Cross-hatched area in bold indicates the core region of duplicate CRs. Light-gray box indicates t...

Data from: Are flatfishes (Pleuronectiformes) monophyletic?

Campbell, Matthew A.
Chen, Wei-Jen
López, J. Andrés

August 2013

All extant species of flatfish (order Pleuronectiformes) are thought to descend from a common ancest...

Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Shi, W
Chen, SX
Kong, XY
Si, LZ
Gong, L
Zhang, YC
Yu, H

January 2018

Background: The monophyly of flatfishes has not been supported in many molecular phylogenetic studie...

FIGURE 3 in Monogenea on exotic Indian freshwater fish. 5. First report of pathogenic Gussevia asota (Platyhelminths) from Oscar Astronotus ocellatus (Agassiz 1831) (Perciformes: Cichlidae)

Tripathi, Amit
Matey, Chawan

January 2023

FIGURE 3. Phylogenetic tree inferred from ML method based on partial 28S rDNA gene sequences of Guss...

Additional file 1: of Phylogeny, expression patterns and regulation of DNA Methyltransferases in early development of the flatfish, Solea senegalensis

Joana Firmino (4254184)
Carlos Carballo (4254190)
Paula Armesto (4254181)
Marco Campinho (4254187)
Deborah Power (3406547)
Manuel Manchado (33092)

July 2017

Sequence information used for phylogenetic analysis. The species, accession numbers (EnsemblâĄ, NCB...

Additional file 4: of Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits

Ehsan Kayal (2813773)
Bastian Bentlage (2819485)
M. Sabrina Pankey (372836)
Aki Ohdera (5167883)
Monica Medina (4371226)
David Plachetzki (3443294)
Allen Collins (270694)
Joseph Ryan (2500639)

April 2018

Exploratory phylogenetic estimation of the 47 AG_62tx partitions that had greater than three myxozoa...

Additional file 2: of Unique nucleolar dominance patterns in distant hybrid lineage derived from Megalobrama Amblycephala × Culter Alburnus

Jun Xiao (179459)
Fangzhou Hu (3483695)
Kaikun Luo (3483698)
Wuhui Li (3483701)
Shaojun Liu (282495)

December 2016

The peak figures of the PCR products sequencing. A, The sequencing peak figures of the PCR products ...

GENETICS/2019/301974

Yongyi Shen (6270632)

January 2019

Supplementary Figure 1: Phylogeny of Anguilliformes used for the detection of positive selection. De...

Additional file 1: of A genome wide survey reveals multiple nematocyst-specific genes in Myxozoa

Erez Shpirer (5744009)
Arik Diamant (5744012)
Paulyn Cartwright (48426)
DorothĂŠe Huchon (3464153)

September 2018

Complete ML phylogenetic tree reconstructed using the NSP6 dataset. ML bootstrap (BPML)/Bayesian pos...

FIG_SUP_2_Subset_trees

Betancur-R., Ricardo
Li, Chenhong
Munroe, Thomas A.
Ballesteros, Jesus A.
Ortí, Guillermo

June 2013

Supplementary Figure 2. Four representative multi-locus phylogenies based on the subset. Color branc...

Figure 2 in Do mismatched genitalia promote mechanical isolation in syntopic species of Phalloceros fishes (Poeciliidae)?

Jennings, W. Bryan
Souto-Santos, Igor C.A.
Buckup, Paulo A.
Zandonà, Eugenia

June 2023

Figure 2. Bayesian mitochondrial (mtDNA) and nuclear (nDNA) gene trees, showing the inferred relatio...

Additional file 3: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Abstract

Extracted data

Additional file 3: of Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae

Abstract

Extracted data

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