A Venn diagram showing the overlap among top 1 million edges of each tissue-specific GRN. (PDF 55Â kb
The RNA-Seq studies used in the analysis. Table S4. Selected gene modules identified from the networ...
Abstract Background Transcription factors (TFs) are proteins that can bind to DNA sequences and regu...
These are the processed datasets used to create networks (raw and filtered expression tables) and pr...
The 353 TFs and 1657 targets included in the 2679 edges shared by four tissue GRNs. (XLSX 70Â kb
GO enrichment analysis for tissue-specific genes in four tissue GRNs. (XLSX 23Â kb
Degree centrality (Number of targets) of top 1 million edges for TFs in (A) Leaf GRN, (B) Root GRN, ...
GO enrichment analysis for 1657 conserved targets in four tissue GRNs. (XLSX 22Â kb
GO enrichment analysis for KN1, FEA4 and O2 targets in four tissue GRNs. (XLSX 19Â kb
Average neighborhood connectivity for four tissue GRNs. The average neighborhood connectivity distri...
Predicted TF targets from top 1 million edges in each tissue. “max _tissue” means which tissue has t...
Predicted TF target overlap with ChIP-Seq confirmed binding genes for KN1, FEA4 and O2. The leaf, ro...
GO enrichment analysis for the largest module in leaf detected by MCL. (XLSX 17 kb
The regulatory network that includes 23 oil concentrationâassociated genes and their linked LA-sco...
Effect of gene expression (calculated by CPM) on the number of interactions for TFs in (A) Leaf GRN,...
Homologs of shared TF by more than two tissues in Arabidopsis. Genes without homologs identified by ...
The RNA-Seq studies used in the analysis. Table S4. Selected gene modules identified from the networ...
Abstract Background Transcription factors (TFs) are proteins that can bind to DNA sequences and regu...
These are the processed datasets used to create networks (raw and filtered expression tables) and pr...
The 353 TFs and 1657 targets included in the 2679 edges shared by four tissue GRNs. (XLSX 70Â kb
GO enrichment analysis for tissue-specific genes in four tissue GRNs. (XLSX 23Â kb
Degree centrality (Number of targets) of top 1 million edges for TFs in (A) Leaf GRN, (B) Root GRN, ...
GO enrichment analysis for 1657 conserved targets in four tissue GRNs. (XLSX 22Â kb
GO enrichment analysis for KN1, FEA4 and O2 targets in four tissue GRNs. (XLSX 19Â kb
Average neighborhood connectivity for four tissue GRNs. The average neighborhood connectivity distri...
Predicted TF targets from top 1 million edges in each tissue. “max _tissue” means which tissue has t...
Predicted TF target overlap with ChIP-Seq confirmed binding genes for KN1, FEA4 and O2. The leaf, ro...
GO enrichment analysis for the largest module in leaf detected by MCL. (XLSX 17 kb
The regulatory network that includes 23 oil concentrationâassociated genes and their linked LA-sco...
Effect of gene expression (calculated by CPM) on the number of interactions for TFs in (A) Leaf GRN,...
Homologs of shared TF by more than two tissues in Arabidopsis. Genes without homologs identified by ...
The RNA-Seq studies used in the analysis. Table S4. Selected gene modules identified from the networ...
Abstract Background Transcription factors (TFs) are proteins that can bind to DNA sequences and regu...
These are the processed datasets used to create networks (raw and filtered expression tables) and pr...
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