The 16S rDNA gene abundance in soils under different treatments determined using qPCR. | ORKG Ask

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Quantification of 16S rRNA gene and ITS fragment copy numbers in the two compartments of the split-root boxes for the four treatments -ARD/-ARD; +ARD/+ARD; -ARD/+ARD; Control/+ARD based on soil dry weight (bulk and rhizosphere soil) or centrifuged soil sample (rhizoplane), respectively.

Maik Lucas (5828804)
Alicia Balbín-Suárez (5828807)
Kornelia Smalla (130483)
Doris Vetterlein (5007281)

October 2018

Data are provided separately for three microhabitats (rhizoplane, rhizosphere and bulk soil) at the ...

Abundance of the 16S rRNA, <i>cbbL</i>, <i>cbbM</i>, <i>apsA</i> and <i>soxB</i> genes in metagenomes of four different soil types determined by qPCR.

Basit Yousuf (630368)
Raghawendra Kumar (630369)
Avinash Mishra (441614)
Bhavanath Jha (441613)

September 2014

<p>Abundance of the 16S rRNA, <i>cbbL</i>, <i>cbbM</i>, <i>apsA</i> and <i>soxB</i> genes in metagen...

Quantification of 16S rRNA gene and ITS fragments in spiked soils.

Doreen Babin (629645)
Cordula Vogel (629646)
Sebastian Zühlke (629647)
Michael Schloter (140906)
Geertje Johanna Pronk (629648)
Katja Heister (629649)
Michael Spiteller (629650)
Ingrid Kögel-Knabner (629651)
Kornelia Smalla (130483)

September 2014

<p>The qPCR analysis of (a) bacterial 16S rRNA gene copy numbers in samples taken 21 days after spik...

Quantifications of crude extracted DNA and microbial abundances according to extraction procedures in different soils.

Pierre Plassart (136022)
Sébastien Terrat (136024)
Bruce Thomson (136027)
Robert Griffiths (136031)
Samuel Dequiedt (136035)
Mélanie Lelievre (136040)
Tiffanie Regnier (136044)
Virginie Nowak (136047)
Mark Bailey (136051)
Philippe Lemanceau (134781)
Antonio Bispo (136054)
Abad Chabbi (136056)
Pierre-Alain Maron (136057)
Christophe Mougel (126533)
Lionel Ranjard (136060)

September 2012

<p>Quantification of (A) crude extracted DNA, (B) 16S rRNA genes, (C) 18S rRNA genes, (D) archaeal 1...

Quantification of bacterial 16S rRNA and <i>dsrA</i> gene copies in bulk and rhizosphere sediments by qPCR (gene copies/g dry sediment; mean ± std; n = 6).

Nicole Regier (307469)
Beat Frey (307473)
Brandon Converse (307476)
Eric Roden (307478)
Alexander Grosse-Honebrink (307481)
Andrea Garcia Bravo (307482)
Claudia Cosio (307483)

February 2013

<p>Quantification of bacterial 16S rRNA and <i>dsrA</i> gene copies in bulk and rhizosphere sediment...

Quantification by qPCR of bacterial 16S rRNA gene copies in samples obtained during the rainy (RS) and dry (DS) seasons for both bulk soil (SL) and rhizosphere (RZ).

Vanessa Nessner Kavamura (459726)
Rodrigo Gouvêa Taketani (156892)
Milena Duarte Lançoni (459727)
Fernando Dini Andreote (113754)
Rodrigo Mendes (459728)
Itamar Soares de Melo (156896)

September 2013

<p>Values indicate the average of three replications, and bars represent standard errors.</p

Quantification of total bacteria by qPCR.

Louise Feld (734565)
Mathis Hjort Hjelmsø (734566)
Morten Schostag Nielsen (734567)
Anne Dorthe Jacobsen (734568)
Regin Rønn (304567)
Flemming Ekelund (304569)
Paul Henning Krogh (734569)
Bjarne Westergaard Strobel (734570)
Carsten Suhr Jacobsen (734571)

May 2015

<p>Abundance of 16S rRNA gene copies is shown in samples from the soil without pesticide (green), wi...

qPCR quantification of 16S rRNA gene in the surface sediment samples of CRB (A) and HOP (B).

Naresh Devarajan (1592782)
Amandine Laffite (1592767)
Crispin Kyela Mulaji (2506867)
Jean-Paul Otamonga (2506870)
Pius Tshimankinda Mpiana (2506864)
Josué Ilunga Mubedi (2506873)
Kandasamy Prabakar (1592791)
Bastiaan Willem Ibelings (1592788)
John Poté (2482633)

February 2016

<p>Values (log transformed) are expressed for the copy number per gram of sediment dry weight normal...

Quantification of 16S rRNA gene and ITS fragment copy numbers in the two compartments of the split-root boxes for the four treatments -ARD/-ARD; +ARD/+ARD; -ARD/+ARD; Control/+ARD based on soil dry weight (bulk and rhizosphere soil) or centrifuged soil sample (rhizoplane), respectively.

Maik Lucas (5828804)
Alicia Balbín-Suárez (5828807)
Kornelia Smalla (130483)
Doris Vetterlein (5007281)

October 2018

Data are provided separately for three microhabitats (rhizoplane, rhizosphere and bulk soil) at the ...

Quantification of 16S rRNA gene and ITS fragments in spiked soils.

Doreen Babin (629645)
Cordula Vogel (629646)
Sebastian Zühlke (629647)
Michael Schloter (140906)
Geertje Johanna Pronk (629648)
Katja Heister (629649)
Michael Spiteller (629650)
Ingrid Kögel-Knabner (629651)
Kornelia Smalla (130483)

September 2014

<p>The qPCR analysis of (a) bacterial 16S rRNA gene copy numbers in samples taken 21 days after spik...

Quantifications of crude extracted DNA and microbial abundances according to extraction procedures in different soils.

Pierre Plassart (136022)
Sébastien Terrat (136024)
Bruce Thomson (136027)
Robert Griffiths (136031)
Samuel Dequiedt (136035)
Mélanie Lelievre (136040)
Tiffanie Regnier (136044)
Virginie Nowak (136047)
Mark Bailey (136051)
Philippe Lemanceau (134781)
Antonio Bispo (136054)
Abad Chabbi (136056)
Pierre-Alain Maron (136057)
Christophe Mougel (126533)
Lionel Ranjard (136060)

September 2012

<p>Quantification of (A) crude extracted DNA, (B) 16S rRNA genes, (C) 18S rRNA genes, (D) archaeal 1...

Quantification of bacterial 16S rRNA and <i>dsrA</i> gene copies in bulk and rhizosphere sediments by qPCR (gene copies/g dry sediment; mean ± std; n = 6).

Nicole Regier (307469)
Beat Frey (307473)
Brandon Converse (307476)
Eric Roden (307478)
Alexander Grosse-Honebrink (307481)
Andrea Garcia Bravo (307482)
Claudia Cosio (307483)

February 2013

<p>Quantification of bacterial 16S rRNA and <i>dsrA</i> gene copies in bulk and rhizosphere sediment...

Quantification by qPCR of bacterial 16S rRNA gene copies in samples obtained during the rainy (RS) and dry (DS) seasons for both bulk soil (SL) and rhizosphere (RZ).

Vanessa Nessner Kavamura (459726)
Rodrigo Gouvêa Taketani (156892)
Milena Duarte Lançoni (459727)
Fernando Dini Andreote (113754)
Rodrigo Mendes (459728)
Itamar Soares de Melo (156896)

September 2013

<p>Values indicate the average of three replications, and bars represent standard errors.</p

Quantification of total bacteria by qPCR.

Louise Feld (734565)
Mathis Hjort Hjelmsø (734566)
Morten Schostag Nielsen (734567)
Anne Dorthe Jacobsen (734568)
Regin Rønn (304567)
Flemming Ekelund (304569)
Paul Henning Krogh (734569)
Bjarne Westergaard Strobel (734570)
Carsten Suhr Jacobsen (734571)

May 2015

<p>Abundance of 16S rRNA gene copies is shown in samples from the soil without pesticide (green), wi...

qPCR quantification of 16S rRNA gene in the surface sediment samples of CRB (A) and HOP (B).

Naresh Devarajan (1592782)
Amandine Laffite (1592767)
Crispin Kyela Mulaji (2506867)
Jean-Paul Otamonga (2506870)
Pius Tshimankinda Mpiana (2506864)
Josué Ilunga Mubedi (2506873)
Kandasamy Prabakar (1592791)
Bastiaan Willem Ibelings (1592788)
John Poté (2482633)

February 2016

<p>Values (log transformed) are expressed for the copy number per gram of sediment dry weight normal...

Quantification of 16S rRNA gene and ITS fragment copy numbers in the two compartments of the split-root boxes for the four treatments -ARD/-ARD; +ARD/+ARD; -ARD/+ARD; Control/+ARD based on soil dry weight (bulk and rhizosphere soil) or centrifuged soil sample (rhizoplane), respectively.

Maik Lucas (5828804)
Alicia Balbín-Suárez (5828807)
Kornelia Smalla (130483)
Doris Vetterlein (5007281)

October 2018

Data are provided separately for three microhabitats (rhizoplane, rhizosphere and bulk soil) at the ...