Additional file 3: of rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Additional file 4: of Fetal growth is associated with the CpG methylation of the P2 promoter of the IGF1 gene

Catherine Le Stunff (5123627)
Anne-Laure Castell (5123624)
Nicolas Todd (4515088)
ClĂŠmence Mille (5123645)
Marie-Pierre Belot (433259)
Nathalie Frament (5123630)
Sylvie Brailly-Tabard (101823)
Alexandra Benachi (78557)
Delphine Fradin (167057)
Pierre BougnĂ¨res (5123648)

April 2018

Figure S3. Relationship between promoter CG methylation and genotypes. (A) Methylation at CpGs-137 o...

Additional file 1: of High burden of birthweight-lowering genetic variants in Africans and Asians

Fasil Tekola-Ayele (469207)
Tsegaselassie Workalemahu (315947)
Azmeraw Amare (5148182)

May 2018

SNPs included in the calculation of genetic risk burden for low birthweight. A list of the 59 autoso...

Additional file 3: of Maternal smoking and high BMI disrupt thyroid gland development

Panagiotis Filis (3190431)
Sabine Hombach-Klonisch (5880704)
Pierre Ayotte (12261)
Nalin Nagrath (5880707)
Ugo Soffientini (468675)
Thomas Klonisch (231283)
Peter OâShaughnessy (4845118)
Paul Fowler (2731453)

October 2018

Table S2. Gene names and primer sequences used for real-time quantitative PCR. Housekeeping genes ar...

Additional file 2: of rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Heidi Marjonen (738402)
Pauliina Auvinen (5413946)
Hanna Kahila (5413937)
Olga Tšuiko (5413934)
Sulev Kõks (91531)
Airi Tiirats (667291)
Triin Viltrop (667290)
Timo Tuuri (465686)
Viveca Söderström-Anttila (5413940)
Anne-Maria Suikkari (5413943)
Andres Salumets (276270)
Aila Tiitinen (3860563)
Nina Kaminen-Ahola (11895)

June 2018

Table S1. DNA methylation levels of H19 ICR (CTCF6), H19 DMR and LINE-1 in control and ART-derived p...

Additional file 1: of DNA methylation changes at infertility genes in newborn twins conceived by in vitro fertilisation

Juan Castillo-Fernandez (3861310)
Yuk Loke (3448697)
Sebastian Bass-Stringer (3861313)
Fei Gao (29262)
Yudong Xia (3417977)
Honglong Wu (237941)
Hanlin Lu (2925378)
Yuan Liu (88411)
Jun Wang (5906)
Tim Spector (153290)
Richard Saffery (136974)
Jeffrey Craig (3448721)
Jordana Bell (667256)

March 2017

Supplementary tables and figures. Table S1 Pregnancy complications and other outcomes. Table S2 PCR ...

Additional file 3: of Comparison of DNA methylation profiles associated with spontaneous preterm birth in placenta and cord blood

Xi-Meng Wang (4996514)
Fu-Ying Tian (4996511)
Li-Jun Fan (6173237)
Chuan-Bo Xie (119937)
Zhong-Zheng Niu (6173243)
Wei-Qing Chen (119970)

January 2019

Table S1. Overlapped SNPs of the sPTB-associated DMPs covered by the 450âK BeadChip. Overlapped kn...

Additional file 3: Table S2. of PPARGC1α gene DNA methylation variations in human placenta mediate the link between maternal hyperglycemia and leptin levels in newborns

Sandra Côté (3454748)
Valérie Gagné-Ouellet (3454745)
Simon-Pierre Guay (2618509)
Catherine Allard (811612)
Andrée-Anne Houde (724714)
Patrice Perron (3136620)
Jean-Patrice Baillargeon (835679)
Daniel Gaudet (259251)
Renée Guérin (261951)
Diane Brisson (3454742)
Marie-France Hivert (174606)
Luigi Bouchard (724712)

June 2016

Spearman’s correlation coefficients between placental DNA methylation and metabolic variables of new...

Additional file 1: of Discovery of rare ancestry-specific variants in the fetal genome that confer risk of preterm premature rupture of membranes (PPROM) and preterm birth

Bhavi Modi (5825438)
Hardik Parikh (3489698)
Maria Teves (5825444)
Rewa Kulkarni (5825447)
Jiang Liyu (5825450)
Roberto Romero (19224)
Timothy York (3978086)
Jerome Strauss (5825453)

October 2018

Table S1. Primers used for METTL7B SNP genotyping. Primers used for genotyping rs115687886, rs138407...

Additional file 30: of Gene editing of the multi-copy H2A.B gene and its importance for fertility

Nur Anuar (6286133)
Sebastian Kurscheid (279557)
Matt Field (551449)
Lei Zhang (38117)
Edward Rebar (6286136)
Philip Gregory (6286139)
Thierry Buchou (6286142)
Josephine Bowles (55046)
Peter Koopman (55047)
David Tremethick (4971583)
Tatiana Soboleva (4221610)

February 2019

Table S17. PCR primers for genotyping of H2A.B.3 encoding genes in founders and the H2A.B3KO colonie...

Additional file 1: of Association of a placental Interleukin-6 genetic variant (rs1800796) with DNA methylation, gene expression and risk of acute chorioamnionitis

Chaini Konwar (5907311)
Giulia Del Gobbo (4959766)
Jefferson Terry (774922)
Wendy Robinson (3494711)

February 2019

Figure S1. Shows the association of SNP genotypes (rs1800795, rs1800796, and rs1554973) with ancestr...

Additional file 1: of Comparison of DNA methylation profiles associated with spontaneous preterm birth in placenta and cord blood

Xi-Meng Wang (4996514)
Fu-Ying Tian (4996511)
Li-Jun Fan (6173237)
Chuan-Bo Xie (119937)
Zhong-Zheng Niu (6173243)
Wei-Qing Chen (119970)

January 2019

Figure S1. Sensitivity analysis of placenta and cord blood models. Scatter plots comparing negative ...

Additional file 8: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Methylation profiling of the LIN28B DMR in dizygotic twins. Schematic representation of the LIN28B l...

Additional file 9: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Quantification of expression levels for imprinted transcripts in placenta samples. Microfluidic-base...

Additional file 7: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Analysis of placenta-specific DMRs in paired samples using the HM450k methylation arrays. (A) Heatma...

Additional file 1: of Birth weight-for-gestational age is associated with DNA methylation at birth and in childhood

Golareh Agha (3503030)
Hanine Hajj (3579050)
Sheryl Rifas-Shiman (3579047)
Allan Just (3448679)
Marie-France Hivert (174606)
Heather Burris (3579044)
Xihong Lin (135298)
Augusto Litonjua (756658)
Emily Oken (231573)
Dawn DeMeo (3115695)
Matthew Gillman (3572204)
Andrea Baccarelli (36523)

November 2016

Descriptive characteristics of methylation levels in birth weight-for-gestational age (BW/GA)-associ...

Additional file 4: of Fetal growth is associated with the CpG methylation of the P2 promoter of the IGF1 gene

Catherine Le Stunff (5123627)
Anne-Laure Castell (5123624)
Nicolas Todd (4515088)
ClĂŠmence Mille (5123645)
Marie-Pierre Belot (433259)
Nathalie Frament (5123630)
Sylvie Brailly-Tabard (101823)
Alexandra Benachi (78557)
Delphine Fradin (167057)
Pierre BougnĂ¨res (5123648)

April 2018

Figure S3. Relationship between promoter CG methylation and genotypes. (A) Methylation at CpGs-137 o...

Additional file 1: of High burden of birthweight-lowering genetic variants in Africans and Asians

Fasil Tekola-Ayele (469207)
Tsegaselassie Workalemahu (315947)
Azmeraw Amare (5148182)

May 2018

SNPs included in the calculation of genetic risk burden for low birthweight. A list of the 59 autoso...

Additional file 3: of Maternal smoking and high BMI disrupt thyroid gland development

Panagiotis Filis (3190431)
Sabine Hombach-Klonisch (5880704)
Pierre Ayotte (12261)
Nalin Nagrath (5880707)
Ugo Soffientini (468675)
Thomas Klonisch (231283)
Peter OâShaughnessy (4845118)
Paul Fowler (2731453)

October 2018

Table S2. Gene names and primer sequences used for real-time quantitative PCR. Housekeeping genes ar...

Additional file 2: of rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Heidi Marjonen (738402)
Pauliina Auvinen (5413946)
Hanna Kahila (5413937)
Olga Tšuiko (5413934)
Sulev Kõks (91531)
Airi Tiirats (667291)
Triin Viltrop (667290)
Timo Tuuri (465686)
Viveca Söderström-Anttila (5413940)
Anne-Maria Suikkari (5413943)
Andres Salumets (276270)
Aila Tiitinen (3860563)
Nina Kaminen-Ahola (11895)

June 2018

Table S1. DNA methylation levels of H19 ICR (CTCF6), H19 DMR and LINE-1 in control and ART-derived p...

Additional file 1: of DNA methylation changes at infertility genes in newborn twins conceived by in vitro fertilisation

Juan Castillo-Fernandez (3861310)
Yuk Loke (3448697)
Sebastian Bass-Stringer (3861313)
Fei Gao (29262)
Yudong Xia (3417977)
Honglong Wu (237941)
Hanlin Lu (2925378)
Yuan Liu (88411)
Jun Wang (5906)
Tim Spector (153290)
Richard Saffery (136974)
Jeffrey Craig (3448721)
Jordana Bell (667256)

March 2017

Supplementary tables and figures. Table S1 Pregnancy complications and other outcomes. Table S2 PCR ...

Additional file 3: of Comparison of DNA methylation profiles associated with spontaneous preterm birth in placenta and cord blood

Xi-Meng Wang (4996514)
Fu-Ying Tian (4996511)
Li-Jun Fan (6173237)
Chuan-Bo Xie (119937)
Zhong-Zheng Niu (6173243)
Wei-Qing Chen (119970)

January 2019

Table S1. Overlapped SNPs of the sPTB-associated DMPs covered by the 450âK BeadChip. Overlapped kn...

Additional file 3: Table S2. of PPARGC1α gene DNA methylation variations in human placenta mediate the link between maternal hyperglycemia and leptin levels in newborns

Sandra Côté (3454748)
Valérie Gagné-Ouellet (3454745)
Simon-Pierre Guay (2618509)
Catherine Allard (811612)
Andrée-Anne Houde (724714)
Patrice Perron (3136620)
Jean-Patrice Baillargeon (835679)
Daniel Gaudet (259251)
Renée Guérin (261951)
Diane Brisson (3454742)
Marie-France Hivert (174606)
Luigi Bouchard (724712)

June 2016

Spearman’s correlation coefficients between placental DNA methylation and metabolic variables of new...

Additional file 1: of Discovery of rare ancestry-specific variants in the fetal genome that confer risk of preterm premature rupture of membranes (PPROM) and preterm birth

Bhavi Modi (5825438)
Hardik Parikh (3489698)
Maria Teves (5825444)
Rewa Kulkarni (5825447)
Jiang Liyu (5825450)
Roberto Romero (19224)
Timothy York (3978086)
Jerome Strauss (5825453)

October 2018

Table S1. Primers used for METTL7B SNP genotyping. Primers used for genotyping rs115687886, rs138407...

Additional file 30: of Gene editing of the multi-copy H2A.B gene and its importance for fertility

Nur Anuar (6286133)
Sebastian Kurscheid (279557)
Matt Field (551449)
Lei Zhang (38117)
Edward Rebar (6286136)
Philip Gregory (6286139)
Thierry Buchou (6286142)
Josephine Bowles (55046)
Peter Koopman (55047)
David Tremethick (4971583)
Tatiana Soboleva (4221610)

February 2019

Table S17. PCR primers for genotyping of H2A.B.3 encoding genes in founders and the H2A.B3KO colonie...

Additional file 1: of Association of a placental Interleukin-6 genetic variant (rs1800796) with DNA methylation, gene expression and risk of acute chorioamnionitis

Chaini Konwar (5907311)
Giulia Del Gobbo (4959766)
Jefferson Terry (774922)
Wendy Robinson (3494711)

February 2019

Figure S1. Shows the association of SNP genotypes (rs1800795, rs1800796, and rs1554973) with ancestr...

Additional file 1: of Comparison of DNA methylation profiles associated with spontaneous preterm birth in placenta and cord blood

Xi-Meng Wang (4996514)
Fu-Ying Tian (4996511)
Li-Jun Fan (6173237)
Chuan-Bo Xie (119937)
Zhong-Zheng Niu (6173243)
Wei-Qing Chen (119970)

January 2019

Figure S1. Sensitivity analysis of placenta and cord blood models. Scatter plots comparing negative ...

Additional file 8: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Methylation profiling of the LIN28B DMR in dizygotic twins. Schematic representation of the LIN28B l...

Additional file 9: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Quantification of expression levels for imprinted transcripts in placenta samples. Microfluidic-base...

Additional file 7: of Differences in expression rather than methylation at placenta-specific imprinted loci is associated with intrauterine growth restriction

Ana Monteagudo-Sánchez (3343796)
Marta Sánchez-Delgado (6404795)
Jose Mora (6404798)
Nuria Santamaría (6404801)
Eduard Gratacós (3128295)
Manel Esteller (74345)
Miguel Heredia (263063)
Virgina Nunes (6404804)
Cecile Choux (6404807)
Patricia Fauque (83218)
Guiomar Nanclares (6404810)
Lauren Anton (588776)
Michal Elovitz (3490259)
Isabel Iglesias-Platas (157423)
David Monk (24463)

February 2019

Analysis of placenta-specific DMRs in paired samples using the HM450k methylation arrays. (A) Heatma...

Additional file 1: of Birth weight-for-gestational age is associated with DNA methylation at birth and in childhood

Golareh Agha (3503030)
Hanine Hajj (3579050)
Sheryl Rifas-Shiman (3579047)
Allan Just (3448679)
Marie-France Hivert (174606)
Heather Burris (3579044)
Xihong Lin (135298)
Augusto Litonjua (756658)
Emily Oken (231573)
Dawn DeMeo (3115695)
Matthew Gillman (3572204)
Andrea Baccarelli (36523)

November 2016

Descriptive characteristics of methylation levels in birth weight-for-gestational age (BW/GA)-associ...

Additional file 4: of Fetal growth is associated with the CpG methylation of the P2 promoter of the IGF1 gene

Catherine Le Stunff (5123627)
Anne-Laure Castell (5123624)
Nicolas Todd (4515088)
ClĂŠmence Mille (5123645)
Marie-Pierre Belot (433259)
Nathalie Frament (5123630)
Sylvie Brailly-Tabard (101823)
Alexandra Benachi (78557)
Delphine Fradin (167057)
Pierre BougnĂ¨res (5123648)

April 2018

Figure S3. Relationship between promoter CG methylation and genotypes. (A) Methylation at CpGs-137 o...

Additional file 1: of High burden of birthweight-lowering genetic variants in Africans and Asians

Fasil Tekola-Ayele (469207)
Tsegaselassie Workalemahu (315947)
Azmeraw Amare (5148182)

May 2018

SNPs included in the calculation of genetic risk burden for low birthweight. A list of the 59 autoso...

Additional file 3: of Maternal smoking and high BMI disrupt thyroid gland development

Panagiotis Filis (3190431)
Sabine Hombach-Klonisch (5880704)
Pierre Ayotte (12261)
Nalin Nagrath (5880707)
Ugo Soffientini (468675)
Thomas Klonisch (231283)
Peter OâShaughnessy (4845118)
Paul Fowler (2731453)

October 2018

Table S2. Gene names and primer sequences used for real-time quantitative PCR. Housekeeping genes ar...

Additional file 3: of rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Abstract

Extracted data

Additional file 3: of rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Abstract

Extracted data

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