Additional file 2: of Leishmania (Mundinia) orientalis n. sp. (Trypanosomatidae), a parasite from Thailand responsible for localised cutaneous leishmaniasis

Narissara Jariyapan (530775)
Teerada Daroontum (5413568)
Krit Jaiwong (5413562)
Wetpisit Chanmol (530779)
Nuchpicha Intakhan (530778)
Sriwatapron Sor-suwan (530774)
Padet Siriyasatien (669580)
Pradya Somboon (137791)
Michelle Bates (5413565)
Paul Bates (134046)

Open link

Publication date

June 2018

DOI

10.6084/m9.figshare.6600368.v1

Abstract

Table S1. Accession numbers for sequences analysed in this study. New sequences are indicated by *. (DOCX 15 kb

Extracted data

Topics

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Data Protection

Additional file 2: of Leishmania (Mundinia) orientalis n. sp. (Trypanosomatidae), a parasite from Thailand responsible for localised cutaneous leishmaniasis

Narissara Jariyapan (530775)
Teerada Daroontum (5413568)
Krit Jaiwong (5413562)
Wetpisit Chanmol (530779)
Nuchpicha Intakhan (530778)
Sriwatapron Sor-suwan (530774)
Padet Siriyasatien (669580)
Pradya Somboon (137791)
Michelle Bates (5413565)
Paul Bates (134046)

Open link

Publication date

June 2018

DOI

10.6084/m9.figshare.6600368.v1

Abstract

Table S1. Accession numbers for sequences analysed in this study. New sequences are indicated by *. (DOCX 15 kb

Extracted data

Topics

Marcello Ceccarelli (522939)
Luca Galluzzi (144241)
Aurora Diotallevi (3569489)
Francesca Andreoni (4030070)
Hailie Fowler (4030067)
Christine Petersen (4030064)
Fabrizio Vitale (3569492)
Mauro Magnani (120149)

May 2017

CLUSTAL multiple alignments of 16âL. (L.) amazonensis kDNA minicircle sequences retrieved from Gen...

Additional file 1: of Malaria parasites of long-tailed macaques in Sarawak, Malaysian Borneo: a novel species and demographic and evolutionary histories

Thamayanthi Nada Raja (5085755)
Ting Huey Hu (5085752)
Ramlah Zainudin (615588)
Kim Sung Lee (712746)
Susan L. Perkins (76181)
Balbir Singh (218132)

April 2018

14 internal primers used to sequence the complete mitochondrial genomes of Plasmodium sp. (DOCX 12Â ...

Additional file 2: Supplementary Data of Genome-wide discovery and development of polymorphic microsatellites from Leishmania panamensis parasites circulating in central Panama

Carlos Restrepo (3475712)
Alejandro Llanes (3149481)
Carolina Guardia (3475715)
Ricardo Lleonart (455751)

October 2015

TableÂ S1.Â Perfect microsatellite loci found in L. panamensis genome. Table S2. Specificity of new...

Additional file 1: Figure S1. of Evaluation of a Multilocus Sequence Typing (MLST) scheme for Leishmania (Viannia) braziliensis and Leishmania (Viannia) panamensis in Colombia

Giovanny Herrera (4023848)
Carolina Hernández (2537188)
Martha Ayala (4023851)
Carolina Flórez (3128916)
Aníbal Teherán (3493019)
Juan Ramírez (3493025)

May 2017

Comparison of haplotype diversity (Hd) by species. a L. panamensis. b L. braziliensis. (PPTX 126 kb

Additional file 2: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Figure S1. Read coverage (based on all the positions) across each chromosome of Sri Lankan L. donova...

Additional file 1: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Table S1-(A). Summary of patient characteristics. Table S1-(B). Genome coverage and number of sequen...

Additional file 2: Table S1. of Evolutionary comparison of prenylation pathway in kinetoplastid Leishmania and its sister Leptomonas

Indira Chauhan (3434873)
Jaspreet Kaur (130950)
Shagun Krishna (1830439)
Arpita Ghosh (106103)
Prashant Singh (729773)
Mohammad Siddiqi (3434876)
Neeloo Singh (283572)

November 2015

L. major and L. infantum Rabs with their accession numbers, gene IDs and chromosome location. Table ...

Additional file 1: Table S1. of New insights into the evolution of the Trypanosoma cruzi clade provided by a new trypanosome species tightly linked to Neotropical Pteronotus bats and related to an Australian lineage of trypanosomes

Luciana Lima (319942)
Oneida Espinosa-Ălvarez (3556652)
C. Pinto (3556667)
Manzelio Cavazzana Jr. (3556664)
Ana Pavan (3556655)
Julio Carranza (3556676)
Burton Lim (3556661)
Marta Campaner (3556670)
Carmen Takata (3556658)
Erney Camargo (3479900)
Patrick Hamilton (3556673)
Marta Teixeira (514064)

December 2015

Prevalence of Trypanosoma wauwau and geographical origin of Pteronotus spp. examined in this study. ...

Additional file 1: Figure S1. of The use of kDNA minicircle subclass relative abundance to differentiate between Leishmania (L.) infantum and Leishmania (L.) amazonensis

Marcello Ceccarelli (522939)
Luca Galluzzi (144241)
Aurora Diotallevi (3569489)
Francesca Andreoni (4030070)
Hailie Fowler (4030067)
Christine Petersen (4030064)
Fabrizio Vitale (3569492)
Mauro Magnani (120149)

May 2017

RFLP analysis. Amplicons obtained with qPCR-ML were digested with EcoRI as described in methods. Dig...

Additional file 5: of Comparative genomic analysis of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis

Hugo Valdivia (3466484)
João Reis-Cunha (3582158)
Gabriela Rodrigues-Luiz (631503)
Rodrigo Baptista (3582137)
G. Baldeviano (3582146)
Robert Gerbasi (3582152)
Deborah Dobson (3582143)
Francine Pratlong (50534)
Patrick Bastien (68928)
Andrés Lescano (3582155)
Stephen Beverley (3582149)
Daniella Bartholomeu (3466478)

September 2015

Normalized allele frequency distributions for PAB-4377 chromosomes. (TIFF 443 kb

Additional file 2: of Genetic diversity of Leishmania donovani that causes cutaneous leishmaniasis in Sri Lanka: a cross sectional study with regional comparisons

Udeshika Kariyawasam (4716279)
Angamuthu Selvapandiyan (132916)
Keshav Rai (781272)
Tasaduq Wani (4716276)
Kavita Ahuja (4716267)
Mizra Beg (4716285)
Hasitha Premathilake (4716270)
Narayan Bhattarai (49643)
Yamuna Siriwardena (4716273)
Daibin Zhong (63683)
Guofa Zhou (34790)
Suman Rijal (181185)
Hira Nakhasi (4716282)
Nadira Karunaweera (762997)

December 2017

The isolation by distance analysis showed the linear correlation between genetic diversity and geogr...

Additional file 1: Table S1. of New epidemiological aspects of visceral and cutaneous leishmaniasis in Taza, Morocco

Maryam Hakkour (3534227)
Asmae Hmamouch (3534230)
Mohamed Alem (3534221)
Abdelkbir Rhalem (3534233)
Fatima Amarir (3534239)
Mohamed Touzani (3534236)
Abderrahim Sadak (3534224)
Hajiba Fellah (3534242)
Faiza Sebti (3534245)

November 2016

Distribution of leishmaniasis cases in different localities of Taza Province in relation to year (be...

Additional file 6: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Figure S5. Heat map showing the SNP allele frequency distribution across chromosomes of Sri Lankan L...

Additional file 2: Figure S2. of The use of kDNA minicircle subclass relative abundance to differentiate between Leishmania (L.) infantum and Leishmania (L.) amazonensis

Marcello Ceccarelli (522939)
Luca Galluzzi (144241)
Aurora Diotallevi (3569489)
Francesca Andreoni (4030070)
Hailie Fowler (4030067)
Christine Petersen (4030064)
Fabrizio Vitale (3569492)
Mauro Magnani (120149)

May 2017

CLUSTAL multiple alignments of 16âL. (L.) amazonensis kDNA minicircle sequences retrieved from Gen...

Additional file 1: of Malaria parasites of long-tailed macaques in Sarawak, Malaysian Borneo: a novel species and demographic and evolutionary histories

Thamayanthi Nada Raja (5085755)
Ting Huey Hu (5085752)
Ramlah Zainudin (615588)
Kim Sung Lee (712746)
Susan L. Perkins (76181)
Balbir Singh (218132)

April 2018

14 internal primers used to sequence the complete mitochondrial genomes of Plasmodium sp. (DOCX 12Â ...

Additional file 2: Supplementary Data of Genome-wide discovery and development of polymorphic microsatellites from Leishmania panamensis parasites circulating in central Panama

Carlos Restrepo (3475712)
Alejandro Llanes (3149481)
Carolina Guardia (3475715)
Ricardo Lleonart (455751)

October 2015

TableÂ S1.Â Perfect microsatellite loci found in L. panamensis genome. Table S2. Specificity of new...

Additional file 1: Figure S1. of Evaluation of a Multilocus Sequence Typing (MLST) scheme for Leishmania (Viannia) braziliensis and Leishmania (Viannia) panamensis in Colombia

Giovanny Herrera (4023848)
Carolina Hernández (2537188)
Martha Ayala (4023851)
Carolina Flórez (3128916)
Aníbal Teherán (3493019)
Juan Ramírez (3493025)

May 2017

Comparison of haplotype diversity (Hd) by species. a L. panamensis. b L. braziliensis. (PPTX 126 kb

Additional file 2: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Figure S1. Read coverage (based on all the positions) across each chromosome of Sri Lankan L. donova...

Additional file 1: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Table S1-(A). Summary of patient characteristics. Table S1-(B). Genome coverage and number of sequen...

Additional file 2: Table S1. of Evolutionary comparison of prenylation pathway in kinetoplastid Leishmania and its sister Leptomonas

Indira Chauhan (3434873)
Jaspreet Kaur (130950)
Shagun Krishna (1830439)
Arpita Ghosh (106103)
Prashant Singh (729773)
Mohammad Siddiqi (3434876)
Neeloo Singh (283572)

November 2015

L. major and L. infantum Rabs with their accession numbers, gene IDs and chromosome location. Table ...

Luciana Lima (319942)
Oneida Espinosa-Ălvarez (3556652)
C. Pinto (3556667)
Manzelio Cavazzana Jr. (3556664)
Ana Pavan (3556655)
Julio Carranza (3556676)
Burton Lim (3556661)
Marta Campaner (3556670)
Carmen Takata (3556658)
Erney Camargo (3479900)
Patrick Hamilton (3556673)
Marta Teixeira (514064)

December 2015

Prevalence of Trypanosoma wauwau and geographical origin of Pteronotus spp. examined in this study. ...

Additional file 1: Figure S1. of The use of kDNA minicircle subclass relative abundance to differentiate between Leishmania (L.) infantum and Leishmania (L.) amazonensis

Marcello Ceccarelli (522939)
Luca Galluzzi (144241)
Aurora Diotallevi (3569489)
Francesca Andreoni (4030070)
Hailie Fowler (4030067)
Christine Petersen (4030064)
Fabrizio Vitale (3569492)
Mauro Magnani (120149)

May 2017

RFLP analysis. Amplicons obtained with qPCR-ML were digested with EcoRI as described in methods. Dig...

Additional file 5: of Comparative genomic analysis of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis

Hugo Valdivia (3466484)
João Reis-Cunha (3582158)
Gabriela Rodrigues-Luiz (631503)
Rodrigo Baptista (3582137)
G. Baldeviano (3582146)
Robert Gerbasi (3582152)
Deborah Dobson (3582143)
Francine Pratlong (50534)
Patrick Bastien (68928)
Andrés Lescano (3582155)
Stephen Beverley (3582149)
Daniella Bartholomeu (3466478)

September 2015

Normalized allele frequency distributions for PAB-4377 chromosomes. (TIFF 443 kb

Additional file 2: of Genetic diversity of Leishmania donovani that causes cutaneous leishmaniasis in Sri Lanka: a cross sectional study with regional comparisons

Udeshika Kariyawasam (4716279)
Angamuthu Selvapandiyan (132916)
Keshav Rai (781272)
Tasaduq Wani (4716276)
Kavita Ahuja (4716267)
Mizra Beg (4716285)
Hasitha Premathilake (4716270)
Narayan Bhattarai (49643)
Yamuna Siriwardena (4716273)
Daibin Zhong (63683)
Guofa Zhou (34790)
Suman Rijal (181185)
Hira Nakhasi (4716282)
Nadira Karunaweera (762997)

December 2017

The isolation by distance analysis showed the linear correlation between genetic diversity and geogr...

Additional file 1: Table S1. of New epidemiological aspects of visceral and cutaneous leishmaniasis in Taza, Morocco

Maryam Hakkour (3534227)
Asmae Hmamouch (3534230)
Mohamed Alem (3534221)
Abdelkbir Rhalem (3534233)
Fatima Amarir (3534239)
Mohamed Touzani (3534236)
Abderrahim Sadak (3534224)
Hajiba Fellah (3534242)
Faiza Sebti (3534245)

November 2016

Distribution of leishmaniasis cases in different localities of Taza Province in relation to year (be...

Additional file 6: of Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Sumudu Samarasinghe (6021458)
Nilakshi Samaranayake (3512369)
Udeshika Kariyawasam (4716279)
Yamuna Siriwardana (6021461)
Hideo Imamura (62469)
Nadira Karunaweera (762997)

November 2018

Figure S5. Heat map showing the SNP allele frequency distribution across chromosomes of Sri Lankan L...

Additional file 2: Figure S2. of The use of kDNA minicircle subclass relative abundance to differentiate between Leishmania (L.) infantum and Leishmania (L.) amazonensis

Marcello Ceccarelli (522939)
Luca Galluzzi (144241)
Aurora Diotallevi (3569489)
Francesca Andreoni (4030070)
Hailie Fowler (4030067)
Christine Petersen (4030064)
Fabrizio Vitale (3569492)
Mauro Magnani (120149)

May 2017

CLUSTAL multiple alignments of 16âL. (L.) amazonensis kDNA minicircle sequences retrieved from Gen...

Additional file 1: of Malaria parasites of long-tailed macaques in Sarawak, Malaysian Borneo: a novel species and demographic and evolutionary histories

Thamayanthi Nada Raja (5085755)
Ting Huey Hu (5085752)
Ramlah Zainudin (615588)
Kim Sung Lee (712746)
Susan L. Perkins (76181)
Balbir Singh (218132)

April 2018

14 internal primers used to sequence the complete mitochondrial genomes of Plasmodium sp. (DOCX 12Â ...

Additional file 2: of Leishmania (Mundinia) orientalis n. sp. (Trypanosomatidae), a parasite from Thailand responsible for localised cutaneous leishmaniasis

Abstract

Extracted data

Topics

Additional file 2: of Leishmania (Mundinia) orientalis n. sp. (Trypanosomatidae), a parasite from Thailand responsible for localised cutaneous leishmaniasis

Abstract

Extracted data

Topics

Related items

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