Core bacterial OTUs* identified in HC and FK samples.

Antoine P. Pagé (768377)
Julien Tremblay (245872)
Luke Masson (136881)
Charles W. Greer (335578)

February 2019

The 100 OTUs that had the highest global average relative abundances in the 172 samples. Samples typ...

Correlation between histomorphometric changes and the type of aerobic bacteria isolated in chronic suppurative otitis media

Živković-Marinkov Emilija
Stanković Milan
Mihailović Dragan
Bojanović Mila

January 2011

Background/Aim. Bacterial flora is a very important factor in pathogenesis of chronic suppurative o...

Abundance (%) of bacterial OTUs that comprise the temporal core within the fecal microbiota of three humans over a one-year period.

Inés Martínez (236509)
Catherine E. Muller (433859)
Jens Walter (229801)

July 2013

Mean and standard deviations were calculated with all samples across the study period.*Sim...

Bacterial OTUs exhibiting significant (BH corrected P < 0.05) differential abundance across HC and FK samples.

Sama Kalyana Chakravarthy (5439593)
Rajagopalaboopathi Jayasudha (5439596)
Konduri Ranjith (3901984)
Anirban Dutta (680561)
Nishal Kumar Pinna (5439590)
Sharmila S. Mande (176619)
Savitri Sharma (20154)
Prashant Garg (20153)
Somasheila I. Murthy (5439587)
Sisinthy Shivaji (129221)

June 2018

Bacterial OTUs exhibiting significant (BH corrected P < 0.05) differential abundance across HC an...

Core_OTUs

Kruttika Phalnikar (5139380)
Krushnamegh Kunte (206332)
Deepa Agashe (3256935)

April 2018

This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se

Core_OTUs

Phalnikar, Kruttika
Kunte, Krushnamegh
Agashe, Deepa

April 2018

This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se

Core OTUs (35) found in all samples* from three geographically disparate populations.

Larry J. Dishaw (545969)
Jaime Flores-Torres (545970)
Simon Lax (451967)
Kristina Gemayel (545971)
Brittany Leigh (545972)
Daniela Melillo (545973)
M. Gail Mueller (545974)
Lenina Natale (545975)
Ivana Zucchetti (545976)
Rosaria De Santis (545977)
Maria Rosaria Pinto (545978)
Gary W. Litman (545979)
Jack A. Gilbert (53472)

April 2014

*Includes starved and unstarved animal samples. Numbers indicate the number of hits or abundance ...

Core OTUs present in at least seven of the nine oral sites.

Susan M. Huse (158264)
Yuzhen Ye (4283)
Yanjiao Zhou (158268)
Anthony A. Fodor (132641)

June 2012

While each 16S amplification (V1–V3 and V3–V5) has 6 core OTUs, there are differences between the...

Bacterial detection in adenoid and middle ear samples from OME and control patients.

G. P. Buzatto (3775687)
E. Tamashiro (3775675)
J. L. Proenca-Modena (3775660)
T. H. Saturno (3775690)
M. C. Prates (3775666)
T. B. Gagliardi (3775681)
L. R. Carenzi (3775672)
E. T. Massuda (3775657)
M. A. Hyppolito (3775669)
F. C. P. Valera (3775684)
E. Arruda (3775678)
W. T. Anselmo-Lima (3775663)

February 2017

Bacterial detection in adenoid and middle ear samples from OME and control patients.</p

Box plots indicating relative abundance of different bacterial OTUs which exhibit significant (BH corrected P < 0.05) differential abundance across HC and FK samples.

Sama Kalyana Chakravarthy (5439593)
Rajagopalaboopathi Jayasudha (5439596)
Konduri Ranjith (3901984)
Anirban Dutta (680561)
Nishal Kumar Pinna (5439590)
Sharmila S. Mande (176619)
Savitri Sharma (20154)
Prashant Garg (20153)
Somasheila I. Murthy (5439587)
Sisinthy Shivaji (129221)

June 2018

Differentially abundant OTUs having a median abundance > 0.1% in at least one group of samples ha...

The pathogenic and likely pathogenic variants of OTOF identified in this study.

Yoh-ichiro Iwasa (415156)
Shin-ya Nishio (181068)
Akiko Sugaya (4952170)
Yuko Kataoka (6707795)
Yukihiko Kanda (4952173)
Mirei Taniguchi (301092)
Kyoko Nagai (533642)
Yasushi Naito (533644)
Tetsuo Ikezono (533643)
Rie Horie (6707798)
Yuika Sakurai (6707801)
Rina Matsuoka (4031258)
Hidehiko Takeda (3896224)
Satoko Abe (181071)
Chiharu Kihara (4952179)
Takashi Ishino (6707804)
Shin-ya Morita (245989)
Satoshi Iwasaki (533639)
Masahiro Takahashi (71299)
Tsukasa Ito (6707807)
Yasuhiro Arai (1908640)
Shin-ichi Usami (181067)

May 2019

The pathogenic and likely pathogenic variants of OTOF identified in this study.</p

NTHI persists in middle ear mucosae as intracellular bacterial communities (IBCs).

Rachael L. Hardison (5866952)
Alistair Harrison (42203)
Rachel M. Wallace (5866955)
Derek R. Heimlich (469459)
Meghan E. O’Bryan (5866958)
Robert P. Sebra (5866961)
Heather W. Pinkett (5866964)
Sheryl S. Justice (176322)
Kevin M. Mason (340370)

October 2018

Thin sections of middle ears from parent or RM33 cohorts were processed for immunofluorescence micro...

Inflammatory Mediator Profiles in Secretory Otitis Media in Relationship to Viable Bacterial Pathogens and Bacterial and Viral Nucleic Acids

Skovbjerg, Susann
Roos, Kristian
Andersson, Maria E.
Rabe, Hardis
Nilsson, Staffan
Lindh, Magnus
Wold, Agnes E

January 2020

Secretory otitis media (SOM) is characterized by persistence of fluid in the middle ear, often follo...

Sources of bacterial DNA-OTUs in the fetal intestine.

Keith A. Martinez II (841159)
Joann Romano-Keeler (5233466)
Joseph P. Zackular (5233469)
Daniel J. Moore (140740)
Robert M. Brucker (136059)
Christopher Hooper (5233472)
Shufang Meng (300282)
Naoko Brown (830304)
Simon Mallal (75844)
Jeff Reese (830307)
David M. Aronoff (313849)
Hakdong Shin (140710)
Maria Gloria Dominguez-Bello (120056)
Jörn-Hendrik Weitkamp (218989)

May 2018

(A) SourceTracker analysis showing predicted origin of OTUs in placenta, mouth and vagina. (B) Ve...

The feline construal of the core microbiota in health and mild periodontitis figure from Abusleme et al. (2013).

Stephen Harris (157097)
Julie Croft (830696)
Ciaran O’Flynn (596047)
Oliver Deusch (497048)
Alison Colyer (278403)
Judi Allsopp (830697)
Lisa Milella (167913)
Ian J. Davis (167925)

November 2015

OTUs were defined as part of the core microbiota if they represented ≥0.5% of sequence reads in a...

Dominant bacterial OTUs.

Antoine P. Pagé (768377)
Julien Tremblay (245872)
Luke Masson (136881)
Charles W. Greer (335578)

February 2019

The 100 OTUs that had the highest global average relative abundances in the 172 samples. Samples typ...

Correlation between histomorphometric changes and the type of aerobic bacteria isolated in chronic suppurative otitis media

Živković-Marinkov Emilija
Stanković Milan
Mihailović Dragan
Bojanović Mila

January 2011

Background/Aim. Bacterial flora is a very important factor in pathogenesis of chronic suppurative o...

Abundance (%) of bacterial OTUs that comprise the temporal core within the fecal microbiota of three humans over a one-year period.

Inés Martínez (236509)
Catherine E. Muller (433859)
Jens Walter (229801)

July 2013

Mean and standard deviations were calculated with all samples across the study period.*Sim...

Bacterial OTUs exhibiting significant (BH corrected P < 0.05) differential abundance across HC and FK samples.

Sama Kalyana Chakravarthy (5439593)
Rajagopalaboopathi Jayasudha (5439596)
Konduri Ranjith (3901984)
Anirban Dutta (680561)
Nishal Kumar Pinna (5439590)
Sharmila S. Mande (176619)
Savitri Sharma (20154)
Prashant Garg (20153)
Somasheila I. Murthy (5439587)
Sisinthy Shivaji (129221)

June 2018

Bacterial OTUs exhibiting significant (BH corrected P < 0.05) differential abundance across HC an...

Core_OTUs

Kruttika Phalnikar (5139380)
Krushnamegh Kunte (206332)
Deepa Agashe (3256935)

April 2018

This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se

Core_OTUs

Phalnikar, Kruttika
Kunte, Krushnamegh
Agashe, Deepa

April 2018

This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se

Core OTUs (35) found in all samples* from three geographically disparate populations.

Larry J. Dishaw (545969)
Jaime Flores-Torres (545970)
Simon Lax (451967)
Kristina Gemayel (545971)
Brittany Leigh (545972)
Daniela Melillo (545973)
M. Gail Mueller (545974)
Lenina Natale (545975)
Ivana Zucchetti (545976)
Rosaria De Santis (545977)
Maria Rosaria Pinto (545978)
Gary W. Litman (545979)
Jack A. Gilbert (53472)

April 2014

*Includes starved and unstarved animal samples. Numbers indicate the number of hits or abundance ...

Core OTUs present in at least seven of the nine oral sites.

Susan M. Huse (158264)
Yuzhen Ye (4283)
Yanjiao Zhou (158268)
Anthony A. Fodor (132641)

June 2012

While each 16S amplification (V1–V3 and V3–V5) has 6 core OTUs, there are differences between the...

Bacterial detection in adenoid and middle ear samples from OME and control patients.

G. P. Buzatto (3775687)
E. Tamashiro (3775675)
J. L. Proenca-Modena (3775660)
T. H. Saturno (3775690)
M. C. Prates (3775666)
T. B. Gagliardi (3775681)
L. R. Carenzi (3775672)
E. T. Massuda (3775657)
M. A. Hyppolito (3775669)
F. C. P. Valera (3775684)
E. Arruda (3775678)
W. T. Anselmo-Lima (3775663)

February 2017

Bacterial detection in adenoid and middle ear samples from OME and control patients.</p

Box plots indicating relative abundance of different bacterial OTUs which exhibit significant (BH corrected P < 0.05) differential abundance across HC and FK samples.

Sama Kalyana Chakravarthy (5439593)
Rajagopalaboopathi Jayasudha (5439596)
Konduri Ranjith (3901984)
Anirban Dutta (680561)
Nishal Kumar Pinna (5439590)
Sharmila S. Mande (176619)
Savitri Sharma (20154)
Prashant Garg (20153)
Somasheila I. Murthy (5439587)
Sisinthy Shivaji (129221)

June 2018

Differentially abundant OTUs having a median abundance > 0.1% in at least one group of samples ha...

The pathogenic and likely pathogenic variants of OTOF identified in this study.

Yoh-ichiro Iwasa (415156)
Shin-ya Nishio (181068)
Akiko Sugaya (4952170)
Yuko Kataoka (6707795)
Yukihiko Kanda (4952173)
Mirei Taniguchi (301092)
Kyoko Nagai (533642)
Yasushi Naito (533644)
Tetsuo Ikezono (533643)
Rie Horie (6707798)
Yuika Sakurai (6707801)
Rina Matsuoka (4031258)
Hidehiko Takeda (3896224)
Satoko Abe (181071)
Chiharu Kihara (4952179)
Takashi Ishino (6707804)
Shin-ya Morita (245989)
Satoshi Iwasaki (533639)
Masahiro Takahashi (71299)
Tsukasa Ito (6707807)
Yasuhiro Arai (1908640)
Shin-ichi Usami (181067)

May 2019

The pathogenic and likely pathogenic variants of OTOF identified in this study.</p

NTHI persists in middle ear mucosae as intracellular bacterial communities (IBCs).

Rachael L. Hardison (5866952)
Alistair Harrison (42203)
Rachel M. Wallace (5866955)
Derek R. Heimlich (469459)
Meghan E. O’Bryan (5866958)
Robert P. Sebra (5866961)
Heather W. Pinkett (5866964)
Sheryl S. Justice (176322)
Kevin M. Mason (340370)

October 2018

Thin sections of middle ears from parent or RM33 cohorts were processed for immunofluorescence micro...

Inflammatory Mediator Profiles in Secretory Otitis Media in Relationship to Viable Bacterial Pathogens and Bacterial and Viral Nucleic Acids

Skovbjerg, Susann
Roos, Kristian
Andersson, Maria E.
Rabe, Hardis
Nilsson, Staffan
Lindh, Magnus
Wold, Agnes E

January 2020

Secretory otitis media (SOM) is characterized by persistence of fluid in the middle ear, often follo...

Sources of bacterial DNA-OTUs in the fetal intestine.

Keith A. Martinez II (841159)
Joann Romano-Keeler (5233466)
Joseph P. Zackular (5233469)
Daniel J. Moore (140740)
Robert M. Brucker (136059)
Christopher Hooper (5233472)
Shufang Meng (300282)
Naoko Brown (830304)
Simon Mallal (75844)
Jeff Reese (830307)
David M. Aronoff (313849)
Hakdong Shin (140710)
Maria Gloria Dominguez-Bello (120056)
Jörn-Hendrik Weitkamp (218989)

May 2018

(A) SourceTracker analysis showing predicted origin of OTUs in placenta, mouth and vagina. (B) Ve...

The feline construal of the core microbiota in health and mild periodontitis figure from Abusleme et al. (2013).

Stephen Harris (157097)
Julie Croft (830696)
Ciaran O’Flynn (596047)
Oliver Deusch (497048)
Alison Colyer (278403)
Judi Allsopp (830697)
Lisa Milella (167913)
Ian J. Davis (167925)

November 2015

OTUs were defined as part of the core microbiota if they represented ≥0.5% of sequence reads in a...

Dominant bacterial OTUs.

Antoine P. Pagé (768377)
Julien Tremblay (245872)
Luke Masson (136881)
Charles W. Greer (335578)

February 2019

The 100 OTUs that had the highest global average relative abundances in the 172 samples. Samples typ...

Correlation between histomorphometric changes and the type of aerobic bacteria isolated in chronic suppurative otitis media

Živković-Marinkov Emilija
Stanković Milan
Mihailović Dragan
Bojanović Mila

January 2011

Background/Aim. Bacterial flora is a very important factor in pathogenesis of chronic suppurative o...

Abundance (%) of bacterial OTUs that comprise the temporal core within the fecal microbiota of three humans over a one-year period.

Inés Martínez (236509)
Catherine E. Muller (433859)
Jens Walter (229801)

July 2013

Mean and standard deviations were calculated with all samples across the study period.*Sim...

Core bacterial OTUs<sup>*</sup> identified in HC and FK samples.

Abstract

Extracted data

Core bacterial OTUs<sup>*</sup> identified in HC and FK samples.

Abstract

Extracted data

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