Table S1. Predicted short linear motifs (pSLiMs) in the hypotonic stress and canonical Wnt signaling pathways. A. Signaling components of the hypotonic stress pathway in S.cerevisiae identified from KEGG, with 36 SLiMs predicted in 11 hypotonic stress signaling proteins using PhyloHMM. B. Signaling components of the human canonical Wnt signaling pathway identified from KEGG, with 24 SLiMs predicted in 16 Wnt signaling proteins using SLiMPrints. Periods indicate positions where any amino acid can match. (PDF 32 kb
Quality assessment of raw data for promoter methylation analysis. (a) MA plot showing the distributi...
Tables. (A) Top 5 Canonical pathways generated by Ingenuity Pathway Analysis (IPA) of differentially...
Ingenuity Pathway Analysis Predicts Estrogen Regulation of MDR- 1 Mechanistic network for ESR1 predi...
Table S2. P-values from Wilcoxon Rank Sum Tests comparing the distribution of KL divergence from mut...
: Figure S2. Controls for mutant protein expression. Confocal images of dual fluorescent reporter st...
Figure S1 KEGG analysis of metabolic networks. KEGG analysis identified the most enriched metabolic ...
: Figure S1. Effects of perturbations in model parameters fall into two groups. The activity paramet...
Figure S2 KEGG analysis of metabolic networks. KEGG analysis identified the most enriched metabolic ...
Schema of the model of signaling circuit dynamics. A) The dynamics of the circuit is modeled taking ...
Figure S1. Direct binding of GroPIns4P to Shp1. Figure S2. Binding of GroPIns4P to the Shp1 WT and S...
GLI binding motif 12-mers. Library of 12-mers enriched in GLIFLAG datasets. Motifs were considered h...
Additional file 1: Figure S1. (A) WT-HeLa cells were treated with 20 μM of J3 for 3, 6, and 12 h for...
Figure S4. Gene Ontology enrichment analysis in phosphoproteins exclusively regulated either at 5, 3...
Figure S1. Upregulation of Wnt signaling leads to proliferation of human ES cell-derived cardiomyocy...
70 pathways enriched to explain the biologically diversity of five pig breeds. These pathways have b...
Quality assessment of raw data for promoter methylation analysis. (a) MA plot showing the distributi...
Tables. (A) Top 5 Canonical pathways generated by Ingenuity Pathway Analysis (IPA) of differentially...
Ingenuity Pathway Analysis Predicts Estrogen Regulation of MDR- 1 Mechanistic network for ESR1 predi...
Table S2. P-values from Wilcoxon Rank Sum Tests comparing the distribution of KL divergence from mut...
: Figure S2. Controls for mutant protein expression. Confocal images of dual fluorescent reporter st...
Figure S1 KEGG analysis of metabolic networks. KEGG analysis identified the most enriched metabolic ...
: Figure S1. Effects of perturbations in model parameters fall into two groups. The activity paramet...
Figure S2 KEGG analysis of metabolic networks. KEGG analysis identified the most enriched metabolic ...
Schema of the model of signaling circuit dynamics. A) The dynamics of the circuit is modeled taking ...
Figure S1. Direct binding of GroPIns4P to Shp1. Figure S2. Binding of GroPIns4P to the Shp1 WT and S...
GLI binding motif 12-mers. Library of 12-mers enriched in GLIFLAG datasets. Motifs were considered h...
Additional file 1: Figure S1. (A) WT-HeLa cells were treated with 20 μM of J3 for 3, 6, and 12 h for...
Figure S4. Gene Ontology enrichment analysis in phosphoproteins exclusively regulated either at 5, 3...
Figure S1. Upregulation of Wnt signaling leads to proliferation of human ES cell-derived cardiomyocy...
70 pathways enriched to explain the biologically diversity of five pig breeds. These pathways have b...
Quality assessment of raw data for promoter methylation analysis. (a) MA plot showing the distributi...
Tables. (A) Top 5 Canonical pathways generated by Ingenuity Pathway Analysis (IPA) of differentially...
Ingenuity Pathway Analysis Predicts Estrogen Regulation of MDR- 1 Mechanistic network for ESR1 predi...