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Pathway results for Danish sister pairs (n = 93); showing only genes related to the Discovery findings.

Johanna M. Huusko (114315)
Minna K. Karjalainen (114311)
Britney E. Graham (5508443)
Ge Zhang (112487)
Emily G. Farrow (5508449)
Neil A. Miller (360386)
Bo Jacobsson (253778)
Haley R. Eidem (5508434)
Jeffrey C. Murray (134603)
Bruce Bedell (5508437)
Patrick Breheny (327218)
Noah W. Brown (5508446)
Frans L. Bødker (5508440)
Nadia K. Litterman (2245750)
Pan-Pan Jiang (46427)
Laura Russell (216705)
David A. Hinds (128908)
Youna Hu (3142158)
Antonis Rokas (140328)
Kari Teramo (114340)
Kaare Christensen (75575)
Scott M. Williams (177668)
Mika Rämet (133146)
Stephen F. Kingsmore (104189)
Kelli K. Ryckman (243574)
Mikko Hallman (114373)
Louis J. Muglia (114366)

Publication date

July 2018

DOI

10.1371/journal.pgen.1007394.t002

Abstract

<p>Pathway results for Danish sister pairs (n = 93); showing only genes related to the Discovery findings.</p

Extracted data

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Bin Peng (31749)
Dianwen Zhu (404720)
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<p>Note: The horizontal axis denotes the positions of the causal SNPs in the corresponding genes (Ai...

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Matt Silver (488246)
Peng Chen (6514)
Ruoying Li (429536)
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<p>(i) Genes (green circles) are mapped to pathways using information on gene-gene interactions (top...

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Jan B. Egan (128161)
Michael T. Barrett (117067)
Mia D. Champion (199178)
Sumit Middha (93228)
Elizabeth Lenkiewicz (117033)
Lisa Evers (117035)
Princy Francis (520542)
Jessica Schmidt (520543)
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Sandra Badar (520546)
Gregory Ahmann (520547)
K. Martin Kortuem (520548)
Nicole J. Boczek (520549)
Rafael Fonseca (128188)
David W. Craig (128068)
John D. Carpten (163698)
Mitesh J. Borad (128074)
A. Keith Stewart (128191)

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<p>GeneGo pathway analysis of genes containing SNV, gene fusions or amplifications.</p

Mapping results of all the SNPs researched.

Lingtao Su (701306)
Guixia Liu (151574)
Han Wang (254423)
Yuan Tian (225002)
Zhihui Zhou (701307)
Liang Han (339956)
Lun Yan (701308)

March 2015

<p>All: the number of SNPs considered; On Gene: the number of SNPs mapped on genes; Between Gene: th...

The coincidence ratios of the candidate genes to RNA array (A) and literature mining (B) for different top-level groups.

Kexin Zhang (301752)
Tuoyi Li (817724)
Yi Fu (315254)
Qinghua Cui (70819)
Wei Kong (294135)

October 2015

<p>The coincidence ratios of the candidate genes to RNA array (A) and literature mining (B) for diff...

Ingenuity pathway analysis of differentially expressed human genes between disease discordant twins.

Lu Gan (33435)
Terrance P. O’Hanlon (824324)
Zhennan Lai (522748)
Rick Fannin (824325)
Melodie L. Weller (824326)
Lisa G. Rider (454041)
John A. Chiorini (209304)
Frederick W. Miller (454042)

November 2015

<p>The analysis compared 789 oligo probes corresponding to 537 human genes significantly differentia...

Networks of 91 pairs of genes showing significant evidence of interactions as identified by MFRG.

Futao Zhang (687370)
Dan Xie (41844)
Meimei Liang (405625)
Momiao Xiong (86978)

April 2016

<p>Networks of 91 pairs of genes showing significant evidence of interactions as identified by MFRG....

SNPs and their respective genes discovered with both IIM and MIM, only with IIM and only with MIM. Between parenthesis we have the number of SNPs in the respective category.

Orlando Anunciação (475568)
Susana Vinga (40513)
Arlindo L. Oliveira (13792)

October 2013

<p>SNPs and their respective genes discovered with both IIM and MIM, only with IIM and only with MIM...

Genetic association results (p values) for pair-wise SNPs interactions (allelic model).

Mirian Sánchez-Morán (5917190)
Juan Andrés Hernández (517983)
Jon Andoni Duñabeitia (343200)
Adelina Estévez (5917193)
Laura Bárcena (5917196)
Aintzane González-Lahera (5917199)
María Teresa Bajo (4798029)
Luis J. Fuentes (5917202)
Ana M. Aransay (432844)
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October 2018

Genetic association results (p values) for pair-wise SNPs interactions (allelic model).</p

Comparison of SNP and gene to pathway mappings for the SP2 and SiMES datasets.

Matt Silver (488246)
Peng Chen (6514)
Ruoying Li (429536)
Ching-Yu Cheng (159319)
Tien-Yin Wong (159436)
E-Shyong Tai (172172)
Yik-Ying Teo (159446)
Giovanni Montana (488247)

November 2013

<p>Comparison of SNP and gene to pathway mappings for the SP2 and SiMES datasets.</p

Results of Ingenuity pathway analysis.

Simone A. Joosten (193144)
Helen A. Fletcher (80699)
Tom H. M. Ottenhoff (160303)

September 2013

<p>All canonical pathways significantly associated with the dataset are depicted (p<0.001), after ap...

Genes analysed (A) and study outcomes (B) of papers published between August 2010 and September 2014.

Elizabeth J. J. Berm (845069)
Margot de Looff (845070)
Bob Wilffert (845071)
Cornelis Boersma (845072)
Lieven Annemans (478151)
Stefan Vegter (572082)
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Maarten J. Postma (239601)

January 2016

<p>Genes analysed (A) and study outcomes (B) of papers published between August 2010 and September 2...

Differences in co-differentially expressed chromosome loci with respect to 3D proximity and pathway participation.

Jignesh R. Parikh (136422)
Yu Xia (8822)
Jarrod A. Marto (104616)

September 2012

<p>Data averages for same chromosome loci pairs are shown as green columns while data averages for d...

Linkage Analysis of Sibling Pairs in Cancer

Kim, Min

January 2002

The main goal of this project is to identify mutations within genes that will increase cancer risk. ...