Table S14. Tabulation of 350 loci with >â1,000,000 short reads per locus based on the Cufflinks output. Data from Additional file 3: Table S3 with the indication HIDATA (column I) is shown. In cases where a gene model was included between the test ID coordinates (Column D), this is indicated using the nomenclature of KAIKObase ( http://sgp.dna.affrc.go.jp/KAIKObase/ ) or it is left empty. Each test was annotated with its corresponding data from the Bowtie2 output [28] (columns R to Y) and the results of the Blastp analysis against the Bm protein reference sequences (NCBI annotation release 102) (columns Z and AA). (XLSX 263 kb
Table S9. Analysis of RNA-seq data from PGs and Br-CC-CA at the wandering stage of Bombyx mori using...
Table S18. Integration of Bombyx mori plasma membrane receptor expression data in PG cells with RNA-...
Figure S6. Expression profile of BmHR4 during the final larval instar and the first day of the pupal...
Table S3. Tabulation of 16,550 unique loci based on the TransDecoder and Cufflinks output. Data from...
Table S2. Tabulation of 43,242 tests carried out by TransDecoder on the Cufflinks output. TransDecod...
Table S1. Tabulation of 61,260 tests carried out by Cufflinks on the raw transcriptomic data. In cas...
Table S15. Tabulation of 1894 gene models, using the nomenclature of KAIKObase ( http://sgp.dna.affr...
Table S4. Tabulation of 51,035 tests carried out by Cufflinks to identify splicing events that lead ...
Table S7. Tabulation of 650 loci of Bombyx mori genone whose transcript abundance in PG cells was us...
Table S8. Tabulation of 10,744 orthologous genes between Bombyx mori and Drosophila melanogaster. Da...
Figure S1. A: Venn diagram comparing the identified genes (see Additional file 3: Table S3), the dif...
Table S13. Integration of Bombyx mori orthologues with the Drosophila melanogaster RG-specific genes...
Table S16. Adenylate cyclases, phosphodiesterases, protein kinases C and phospholipases C of Bombyx ...
Figure S4. Posterior probability tree of Bombyx mori cytochrome P450 (CYP) proteins. The short-chain...
Figure S5. Circos plot comparing the expression profiles of Halloween genes and other ecdysteroidoge...
Table S9. Analysis of RNA-seq data from PGs and Br-CC-CA at the wandering stage of Bombyx mori using...
Table S18. Integration of Bombyx mori plasma membrane receptor expression data in PG cells with RNA-...
Figure S6. Expression profile of BmHR4 during the final larval instar and the first day of the pupal...
Table S3. Tabulation of 16,550 unique loci based on the TransDecoder and Cufflinks output. Data from...
Table S2. Tabulation of 43,242 tests carried out by TransDecoder on the Cufflinks output. TransDecod...
Table S1. Tabulation of 61,260 tests carried out by Cufflinks on the raw transcriptomic data. In cas...
Table S15. Tabulation of 1894 gene models, using the nomenclature of KAIKObase ( http://sgp.dna.affr...
Table S4. Tabulation of 51,035 tests carried out by Cufflinks to identify splicing events that lead ...
Table S7. Tabulation of 650 loci of Bombyx mori genone whose transcript abundance in PG cells was us...
Table S8. Tabulation of 10,744 orthologous genes between Bombyx mori and Drosophila melanogaster. Da...
Figure S1. A: Venn diagram comparing the identified genes (see Additional file 3: Table S3), the dif...
Table S13. Integration of Bombyx mori orthologues with the Drosophila melanogaster RG-specific genes...
Table S16. Adenylate cyclases, phosphodiesterases, protein kinases C and phospholipases C of Bombyx ...
Figure S4. Posterior probability tree of Bombyx mori cytochrome P450 (CYP) proteins. The short-chain...
Figure S5. Circos plot comparing the expression profiles of Halloween genes and other ecdysteroidoge...
Table S9. Analysis of RNA-seq data from PGs and Br-CC-CA at the wandering stage of Bombyx mori using...
Table S18. Integration of Bombyx mori plasma membrane receptor expression data in PG cells with RNA-...
Figure S6. Expression profile of BmHR4 during the final larval instar and the first day of the pupal...