This paper presents the potential of limestone based catalyst for transesterification of high free fatty acid (FFA) rubber seed oil (RSO). Pre-calcinated limestone known as clinker was activated using methanol and transesterification was performed under reflux with constant stirring. Mineral composition of the catalyst was analysed using x-ray fluorescence (XRF) with in build x-ray diffraction (XRD). The rubber seed oil was obtained using both microwave and soxhlet extraction using hexane as solvent. FFA content and fatty acid methyl ester content were determined using gas chromatography mass spectrometry (GC-MS). The results showed an efficient conversion (up to 96.9) of high FFA rubber seed oil to biodiesel. The results suggest that the c...