Partial reconfiguration is a technique used to increase the flexibility of an FPGA-based system by reprogramming parts of the system dynamically without interrupting the operation of the other modules. Despite the runtime benefits offered by partially reconfigurable (PR) systems, creating and storing partial bitstreams (PBs) are becoming major concerns for system architects when the numbers of reconfigurable partitions (RPs) and PR modules (PRMs) increase. It takes significant amount of time to generate the PBs for PR systems with large number of RPs and PRMs. More importantly, when the mapping relationship between PRMs and RPs is many-to-many, several almost-identical PBs of one PRM must be stored separately which leads to inefficient util...