Example regions showing different recombination patterns between four cattle breeds. Top 2: males; Bottom 2: females. The Holstein data have been published previously [15] and are included for comparison purposes. (DOCX 183 kb
Figure S6. Long-range differences of allele frequencies and heterozygosity between unselected and se...
Note S1. Brief description of the Iberian native cattle breeds sampled in our study. Table S1. Iberi...
Table S1. Primer information for CNV validation. Table S2. Characteristics of CNV and their overlapp...
Eight breed- and sex-specific recombination maps for Holstein, Jersey, Brown Swiss, and Ayrshire in ...
Correlation between recombination maps of four cattle breeds using the same sample size. The average...
Figure S3. Overview of allele frequency differences (AFD) and extended haplotype homozygosity (EHH)....
Figure S3. Plot of -2logLikelihood values computed for 198 purported Akaushi cattle, based on the ad...
Figure S1. Density plot of genomic breed composition of 1424 animals putatively presented as Santa G...
Table S1. Correlations of -2logLikelihood values computed for 198 purported Akaushi cattle using the...
Figure S7. Long-range differences of allele frequencies and heterozygosity between an elite group (G...
Figure S4. Plots of -2logLikelihood for 1770 reference Brangus animals (green circles) after removin...
Figure S1. Comparison of proportion of polymorphic (Pn). Figure S2. Comparison of minor allele frequ...
Figure S5. Plots of -2logLikelihood for 583 BeefMaster cattle after removing outliers. The likelihoo...
MDS plot of the 20 breeds. Each color in the plot corresponds to the color in the legend. Figure S2....
Figure S6. Plots of -2logLikelihood for 291 Santa Gertrudis cattle after removing outliers. The like...
Figure S6. Long-range differences of allele frequencies and heterozygosity between unselected and se...
Note S1. Brief description of the Iberian native cattle breeds sampled in our study. Table S1. Iberi...
Table S1. Primer information for CNV validation. Table S2. Characteristics of CNV and their overlapp...
Eight breed- and sex-specific recombination maps for Holstein, Jersey, Brown Swiss, and Ayrshire in ...
Correlation between recombination maps of four cattle breeds using the same sample size. The average...
Figure S3. Overview of allele frequency differences (AFD) and extended haplotype homozygosity (EHH)....
Figure S3. Plot of -2logLikelihood values computed for 198 purported Akaushi cattle, based on the ad...
Figure S1. Density plot of genomic breed composition of 1424 animals putatively presented as Santa G...
Table S1. Correlations of -2logLikelihood values computed for 198 purported Akaushi cattle using the...
Figure S7. Long-range differences of allele frequencies and heterozygosity between an elite group (G...
Figure S4. Plots of -2logLikelihood for 1770 reference Brangus animals (green circles) after removin...
Figure S1. Comparison of proportion of polymorphic (Pn). Figure S2. Comparison of minor allele frequ...
Figure S5. Plots of -2logLikelihood for 583 BeefMaster cattle after removing outliers. The likelihoo...
MDS plot of the 20 breeds. Each color in the plot corresponds to the color in the legend. Figure S2....
Figure S6. Plots of -2logLikelihood for 291 Santa Gertrudis cattle after removing outliers. The like...
Figure S6. Long-range differences of allele frequencies and heterozygosity between unselected and se...
Note S1. Brief description of the Iberian native cattle breeds sampled in our study. Table S1. Iberi...
Table S1. Primer information for CNV validation. Table S2. Characteristics of CNV and their overlapp...
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