Additional file 2: of Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

A genome-wide survey of structural variation between human and chimpanzee

Newman, Tl
Tuzun, E
Morrison, Va
Hayden, Ke
Ventura, Mario
Mcgrath, Sd
Rocchi, Mariano
Eichler, Ee

January 2005

Structural changes (deletions, insertions, and inversions) between human and chimpanzee genomes have...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Additional file 1: of Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

M. Saitou (5144195)
Y. Satta (5144192)
O. Gokcumen (5144198)
T. Ishida (537443)

April 2018

Table S1. The functional GSTM analyzed. Table S2. The GSTM pseudogenes detected. Table S3. PCR prime...

Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

M. Saitou
Y. Satta
O. Gokcumen
T. Ishida

April 2018

Abstract Background The common deletion of the glutathione S-transferase Mu 1 (GSTM1) gene in humans...

Additional file 1: Figure S1. of Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates

Toshiyuki Hayakawa (370039)
Zahra Khedri (2185102)
Flavio Schwarz (196967)
Corinna Landig (4614310)
Suh-Yuen Liang (577451)
Hai Yu (366836)
Xi Chen (35903)
Naoko Fujito (4614313)
Yoko Satta (126775)
Ajit Varki (375367)
Takashi Angata (1951522)

November 2017

Alignment of genomic nucleotide sequences of SIGLEC11 and SIGLEC16 in human, chimpanzee, gorilla, gi...

Additional file 1: of Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

Annette Damert (615500)

September 2018

SVA_D elements in gorilla, chimpanzee and humans. Subfamily denominations, total number of elements ...

Additional file 2: Figure S2. of Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates

Toshiyuki Hayakawa (370039)
Zahra Khedri (2185102)
Flavio Schwarz (196967)
Corinna Landig (4614310)
Suh-Yuen Liang (577451)
Hai Yu (366836)
Xi Chen (35903)
Naoko Fujito (4614313)
Yoko Satta (126775)
Ajit Varki (375367)
Takashi Angata (1951522)

November 2017

Phylogenetic relationships of the A/Aâ regions of SIGLEC11 and SIGLEC16. The partial sequence of b...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, T.
Hillier, L.
Eichler, E.
Zody, M.
Jaffe, D.
Yang, S.
Enard, W.
Hellmann, I.
Lindblad-Toh, K.
Altheide, T.
Archidiacono, N.
Bork, P.
Butler, J.
Chang, J.
Cheng, Z.
Chinwalla, A.
de Jong, P.
Delehaunty, K.
Fronick, C.
Fulton, L.
Gilad, Y.
Glusman, G.
Gnerre, S.
Graves, T.
Hayakawa, T.
Hayden, K.
Huang, X.
Ji, H.
Kent, W.
King, M.
Kulbokasl, E.
Lee, M.
Liu, G.
Lopez-Otin, C.
Makova, K.
Man, O.
Mardis, E.
Mauceli, E.
Miner, T.
Nash, W.
Nelson, J.
Pääbo, S.
Patterson, N.
Pohl, C.
Pollard, K.
Prüfer, K.
Puente, X.
Reich, D.
Rocchi, M.
Rosenbloom, K.
Ruvolo, M.
Richter, D.
Schaffner, S.
Smit, A.
Smith, S.
Suyama, M.
Taylor, J.
Torrents, D.
Tuzun, E.
Varki, A.
Velasco, G.
Ventura, M.
Wallis, J.
Wendl, M.
Wilson, R.
Lander, E.
Waterston, R.

September 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, Tarjei S.
Hillier, LaDeana W.
Eichler, Evan E.
Zody, Michael C.
Jaffe, David B.
Yang, Shiaw-Pyng
Enard, Wolfgang
Hellmann, Ines
Lindblad-Toh, Kerstin
Altheide, Tasha K.
Archidiacono, Nicoletta
Bork, Peer
Butler, Jonathan
Chang, Jean L.
Cheng, Ze
Chinwalla, Asif T.
de Jong, Pieter
Delehaunty, Kimberley D.
Fronick, Catrina C.
Fulton, Lucinda L.
Gilad, Yoav
Glusman, Gustavo
Gnerre, Sante
Graves, Tina A.
Hayakawa, Toshiyuki
Hayden, Karen E.
Huang, Xiaoqiu
Ji, Hongkai
Kent, W. James
King, Mary-Claire
Kulbokasl, Edward J.
Lee, Ming K.
Liu, Ge
Lopez-Otin, Carlos
Makova, Kateryna D.
Man, Orna
Mardis, Elaine R.
Mauceli, Evan
Miner, Tracie L.
Nash, William E.
Nelson, Joanne O.
Pääbo, Svante
Patterson, Nick J.
Pohl, Craig S.
Pollard, Katherine S.
Prüfer, Kay
Puente, Xose S.
Reich, David
Rocchi, Mariano
Rosenbloom, Kate
Ruvolo, Maryellen
Richter, Daniel J.
Schaffner, Stephen F.
Smit, Arian F. A.
Smith, Scott M.
Suyama, Mikita
Taylor, James
Torrents, David
Tuzun, Eray
Varki, Ajit
Velasco, Gloria
Ventura, Mario
Wallis, John W.
Wendl, Michael C.
Wilson, Richard K.
Lander, Eric S.
Waterston, Robert H.

January 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, T.
Hillier, L.
Eichler, E.
Zody, M.
Jaffe, D.
Yang, S.
Enard, W.
Hellmann, I.
Lindblad-Toh, K.
Altheide, T.
Archidiacono, N.
Bork, P.
Butler, J.
Chang, J.
Cheng, Z.
Chinwalla, A.
de Jong, P.
Delehaunty, K.
Fronick, C.
Fulton, L.
Gilad, Y.
Glusman, G.
Gnerre, S.
Graves, T.
Hayakawa, T.
Hayden, K.
Huang, X.
Ji, H.
Kent, W.
King, M.
Kulbokasl, E.
Lee, M.
Liu, G.
Lopez-Otin, C.
Makova, K.
Man, O.
Mardis, E.
Mauceli, E.
Miner, T.
Nash, W.
Nelson, J.
Pääbo, S.
Patterson, N.
Pohl, C.
Pollard, K.
Prüfer, K.
Puente, X.
Reich, D.
Rocchi, M.
Rosenbloom, K.
Ruvolo, M.
Richter, D.
Schaffner, S.
Smit, A.
Smith, S.
Suyama, M.
Taylor, J.
Torrents, D.
Tuzun, E.
Varki, A.
Velasco, G.
Ventura, M.
Wallis, J.
Wendl, M.
Wilson, R.
Lander, E.
Waterston, R.

September 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Additional file 14: of Impact of non-LTR retrotransposons in the differentiation and evolution of anatomically modern humans

Etienne Guichard (5636255)
Valentina Peona (5636258)
Guidantonio Malagoli Tagliazucchi (739841)
Lucia Abitante (5636264)
Evelyn Jagoda (849523)
Margherita Musella (5636270)
Marco Ricci (185939)
Alejandro Rubio-Roldán (5636399)
Stefania Sarno (416335)
Donata Luiselli (414847)
Davide Pettener (251380)
Cristian Taccioli (277709)
Luca Pagani (545142)
Jose Garcia-Perez (5636276)
Alessio Boattini (416334)

August 2018

Chimp-specific RIs in genes. Proportion of ENSEMBL-annotated genes in the whole reference genome Pan...

Additional file 3: of Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

Annette Damert (615500)

September 2018

Consensus sequences of the SINE-R domains of SVA_D subfamilies in gorilla (gg), chimpanzee (pt) and ...

A genome-wide survey of structural variation between human and chimpanzee

Newman TL
Tuzun E
Morrison VA
Hayden KE
VENTURA, MARIO
McGrath SD
ROCCHI, Mariano
Eichler EE

January 2005

Structural changes (deletions, insertions, and inversions) between human and chimpanzee genomes have...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

A genome-wide survey of structural variation between human and chimpanzee

Newman, Tl
Tuzun, E
Morrison, Va
Hayden, Ke
Ventura, Mario
Mcgrath, Sd
Rocchi, Mariano
Eichler, Ee

January 2005

Structural changes (deletions, insertions, and inversions) between human and chimpanzee genomes have...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Additional file 1: of Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

M. Saitou (5144195)
Y. Satta (5144192)
O. Gokcumen (5144198)
T. Ishida (537443)

April 2018

Table S1. The functional GSTM analyzed. Table S2. The GSTM pseudogenes detected. Table S3. PCR prime...

Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

M. Saitou
Y. Satta
O. Gokcumen
T. Ishida

April 2018

Abstract Background The common deletion of the glutathione S-transferase Mu 1 (GSTM1) gene in humans...

Additional file 1: Figure S1. of Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates

Toshiyuki Hayakawa (370039)
Zahra Khedri (2185102)
Flavio Schwarz (196967)
Corinna Landig (4614310)
Suh-Yuen Liang (577451)
Hai Yu (366836)
Xi Chen (35903)
Naoko Fujito (4614313)
Yoko Satta (126775)
Ajit Varki (375367)
Takashi Angata (1951522)

November 2017

Alignment of genomic nucleotide sequences of SIGLEC11 and SIGLEC16 in human, chimpanzee, gorilla, gi...

Additional file 1: of Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

Annette Damert (615500)

September 2018

SVA_D elements in gorilla, chimpanzee and humans. Subfamily denominations, total number of elements ...

Additional file 2: Figure S2. of Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates

Toshiyuki Hayakawa (370039)
Zahra Khedri (2185102)
Flavio Schwarz (196967)
Corinna Landig (4614310)
Suh-Yuen Liang (577451)
Hai Yu (366836)
Xi Chen (35903)
Naoko Fujito (4614313)
Yoko Satta (126775)
Ajit Varki (375367)
Takashi Angata (1951522)

November 2017

Phylogenetic relationships of the A/Aâ regions of SIGLEC11 and SIGLEC16. The partial sequence of b...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, T.
Hillier, L.
Eichler, E.
Zody, M.
Jaffe, D.
Yang, S.
Enard, W.
Hellmann, I.
Lindblad-Toh, K.
Altheide, T.
Archidiacono, N.
Bork, P.
Butler, J.
Chang, J.
Cheng, Z.
Chinwalla, A.
de Jong, P.
Delehaunty, K.
Fronick, C.
Fulton, L.
Gilad, Y.
Glusman, G.
Gnerre, S.
Graves, T.
Hayakawa, T.
Hayden, K.
Huang, X.
Ji, H.
Kent, W.
King, M.
Kulbokasl, E.
Lee, M.
Liu, G.
Lopez-Otin, C.
Makova, K.
Man, O.
Mardis, E.
Mauceli, E.
Miner, T.
Nash, W.
Nelson, J.
Pääbo, S.
Patterson, N.
Pohl, C.
Pollard, K.
Prüfer, K.
Puente, X.
Reich, D.
Rocchi, M.
Rosenbloom, K.
Ruvolo, M.
Richter, D.
Schaffner, S.
Smit, A.
Smith, S.
Suyama, M.
Taylor, J.
Torrents, D.
Tuzun, E.
Varki, A.
Velasco, G.
Ventura, M.
Wallis, J.
Wendl, M.
Wilson, R.
Lander, E.
Waterston, R.

September 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, Tarjei S.
Hillier, LaDeana W.
Eichler, Evan E.
Zody, Michael C.
Jaffe, David B.
Yang, Shiaw-Pyng
Enard, Wolfgang
Hellmann, Ines
Lindblad-Toh, Kerstin
Altheide, Tasha K.
Archidiacono, Nicoletta
Bork, Peer
Butler, Jonathan
Chang, Jean L.
Cheng, Ze
Chinwalla, Asif T.
de Jong, Pieter
Delehaunty, Kimberley D.
Fronick, Catrina C.
Fulton, Lucinda L.
Gilad, Yoav
Glusman, Gustavo
Gnerre, Sante
Graves, Tina A.
Hayakawa, Toshiyuki
Hayden, Karen E.
Huang, Xiaoqiu
Ji, Hongkai
Kent, W. James
King, Mary-Claire
Kulbokasl, Edward J.
Lee, Ming K.
Liu, Ge
Lopez-Otin, Carlos
Makova, Kateryna D.
Man, Orna
Mardis, Elaine R.
Mauceli, Evan
Miner, Tracie L.
Nash, William E.
Nelson, Joanne O.
Pääbo, Svante
Patterson, Nick J.
Pohl, Craig S.
Pollard, Katherine S.
Prüfer, Kay
Puente, Xose S.
Reich, David
Rocchi, Mariano
Rosenbloom, Kate
Ruvolo, Maryellen
Richter, Daniel J.
Schaffner, Stephen F.
Smit, Arian F. A.
Smith, Scott M.
Suyama, Mikita
Taylor, James
Torrents, David
Tuzun, Eray
Varki, Ajit
Velasco, Gloria
Ventura, Mario
Wallis, John W.
Wendl, Michael C.
Wilson, Richard K.
Lander, Eric S.
Waterston, Robert H.

January 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Initial sequence of the chimpanzee genome and comparison with the human genome

Mikkelsen, T.
Hillier, L.
Eichler, E.
Zody, M.
Jaffe, D.
Yang, S.
Enard, W.
Hellmann, I.
Lindblad-Toh, K.
Altheide, T.
Archidiacono, N.
Bork, P.
Butler, J.
Chang, J.
Cheng, Z.
Chinwalla, A.
de Jong, P.
Delehaunty, K.
Fronick, C.
Fulton, L.
Gilad, Y.
Glusman, G.
Gnerre, S.
Graves, T.
Hayakawa, T.
Hayden, K.
Huang, X.
Ji, H.
Kent, W.
King, M.
Kulbokasl, E.
Lee, M.
Liu, G.
Lopez-Otin, C.
Makova, K.
Man, O.
Mardis, E.
Mauceli, E.
Miner, T.
Nash, W.
Nelson, J.
Pääbo, S.
Patterson, N.
Pohl, C.
Pollard, K.
Prüfer, K.
Puente, X.
Reich, D.
Rocchi, M.
Rosenbloom, K.
Ruvolo, M.
Richter, D.
Schaffner, S.
Smit, A.
Smith, S.
Suyama, M.
Taylor, J.
Torrents, D.
Tuzun, E.
Varki, A.
Velasco, G.
Ventura, M.
Wallis, J.
Wendl, M.
Wilson, R.
Lander, E.
Waterston, R.

September 2005

Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes). Through comparis...

Additional file 14: of Impact of non-LTR retrotransposons in the differentiation and evolution of anatomically modern humans

Etienne Guichard (5636255)
Valentina Peona (5636258)
Guidantonio Malagoli Tagliazucchi (739841)
Lucia Abitante (5636264)
Evelyn Jagoda (849523)
Margherita Musella (5636270)
Marco Ricci (185939)
Alejandro Rubio-Roldán (5636399)
Stefania Sarno (416335)
Donata Luiselli (414847)
Davide Pettener (251380)
Cristian Taccioli (277709)
Luca Pagani (545142)
Jose Garcia-Perez (5636276)
Alessio Boattini (416334)

August 2018

Chimp-specific RIs in genes. Proportion of ENSEMBL-annotated genes in the whole reference genome Pan...

Additional file 3: of Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

Annette Damert (615500)

September 2018

Consensus sequences of the SINE-R domains of SVA_D subfamilies in gorilla (gg), chimpanzee (pt) and ...

A genome-wide survey of structural variation between human and chimpanzee

Newman TL
Tuzun E
Morrison VA
Hayden KE
VENTURA, MARIO
McGrath SD
ROCCHI, Mariano
Eichler EE

January 2005

Structural changes (deletions, insertions, and inversions) between human and chimpanzee genomes have...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

A genome-wide survey of structural variation between human and chimpanzee

Newman, Tl
Tuzun, E
Morrison, Va
Hayden, Ke
Ventura, Mario
Mcgrath, Sd
Rocchi, Mariano
Eichler, Ee

January 2005

Structural changes (deletions, insertions, and inversions) between human and chimpanzee genomes have...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Genome and Transcriptome Comparisons between Human and Chimpanzee

Wetterbom, Anna

January 2010

The chimpanzee is humankind’s closest living relative and the two species diverged ~6 million years ...

Additional file 2: of Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

Abstract

Extracted data

Additional file 2: of Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees

Abstract

Extracted data

Related items

Related items