Additional file 2: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Additional file 17: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S11. Selected non-TF genes for lignin validation using Arabidopsis mutants. (DOCX 17Â kb

Additional file 1: of Transcriptome analysis of secondary cell wall development in Medicago truncatula

Huanzhong Wang (3453971)
Jung Yang (3453968)
Fang Chen (34476)
Ivone Torres-Jerez (40667)
Yuhong Tang (56216)
Mingyi Wang (91634)
Qian Du (280345)
Xiaofei Cheng (90802)
Jiangqi Wen (612044)
Richard Dixon (3416687)

January 2016

Supplemental Figure 1. Expression pattern analysis of cluster 10 transcription factor genes. Supplem...

Additional file 1: Table S1: of Transcriptome analysis of Brassica napus pod using RNA-Seq and identification of lipid-related candidate genes

Hai-Ming Xu (228762)
Xiang-Dong Kong (3535055)
Fei Chen (13690)
Ji-Xiang Huang (3535049)
Xiang-Yang Lou (228769)
Jian-Yi Zhao (3535052)

October 2015

The top 20 most represented GO terms of DEG in the biological process category at the 5â7 DAF (S1-...

Additional file 1: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S1A. Differential expression of DH1 vs DH4 less than point 5 (microarray). (XLSX 360Â kb

Additional file 4: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S2B. Differential expression of DH1 vs YN1 greater than 2 (microarray). (XLSX 565Â kb

Additional file 3: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S2A. Differential expression of DH1 vs YN1 less than point 5 (microarray). (XLSX 496Â kb

Additional file 10: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S5B. Differential expression of DH2 vs YN2 greater than 2 (microarray). (XLSX 585Â kb

Additional file 7: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S4A. Differential expression of DH4 vs YN4 less than point 5 (microarray). (XLSX 728Â kb

Additional file 12: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S6B. Differential expression of DH3 vs YN3 greater than 2 (microarray). (XLSX 556Â kb

Additional file 11: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S6A. Differential expression of DH3 vs YN3 less than point 5 (microarray). (XLSX 512Â kb

Additional file 6: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S3B. Differential expression of YN1 vs YN4 greater than 2 (microarray). (XLSX 417Â kb

Additional file 5: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S3A. Differential expression of YN1 vs YN4 less than point 5 (microarray). (XLSX 226Â kb

Additional file 15: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S9. Ten categories of TFs with BN oligonucleotides retrieved from stem section comparisons of ...

Additional file 16: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S10. Targeted transcription factors selected for lignin validation using Arabidopsis mutants. ...

Additional file 14: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S8. Differential upregulation of genes involved in cellular carbohydrate metabolic processing....

Additional file 17: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S11. Selected non-TF genes for lignin validation using Arabidopsis mutants. (DOCX 17Â kb

Additional file 1: of Transcriptome analysis of secondary cell wall development in Medicago truncatula

Huanzhong Wang (3453971)
Jung Yang (3453968)
Fang Chen (34476)
Ivone Torres-Jerez (40667)
Yuhong Tang (56216)
Mingyi Wang (91634)
Qian Du (280345)
Xiaofei Cheng (90802)
Jiangqi Wen (612044)
Richard Dixon (3416687)

January 2016

Supplemental Figure 1. Expression pattern analysis of cluster 10 transcription factor genes. Supplem...

Additional file 1: Table S1: of Transcriptome analysis of Brassica napus pod using RNA-Seq and identification of lipid-related candidate genes

Hai-Ming Xu (228762)
Xiang-Dong Kong (3535055)
Fei Chen (13690)
Ji-Xiang Huang (3535049)
Xiang-Yang Lou (228769)
Jian-Yi Zhao (3535052)

October 2015

The top 20 most represented GO terms of DEG in the biological process category at the 5â7 DAF (S1-...

Additional file 1: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S1A. Differential expression of DH1 vs DH4 less than point 5 (microarray). (XLSX 360Â kb

Additional file 4: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S2B. Differential expression of DH1 vs YN1 greater than 2 (microarray). (XLSX 565Â kb

Additional file 3: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S2A. Differential expression of DH1 vs YN1 less than point 5 (microarray). (XLSX 496Â kb

Additional file 10: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S5B. Differential expression of DH2 vs YN2 greater than 2 (microarray). (XLSX 585Â kb

Additional file 7: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S4A. Differential expression of DH4 vs YN4 less than point 5 (microarray). (XLSX 728Â kb

Additional file 12: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S6B. Differential expression of DH3 vs YN3 greater than 2 (microarray). (XLSX 556Â kb

Additional file 11: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S6A. Differential expression of DH3 vs YN3 less than point 5 (microarray). (XLSX 512Â kb

Additional file 6: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S3B. Differential expression of YN1 vs YN4 greater than 2 (microarray). (XLSX 417Â kb

Additional file 5: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S3A. Differential expression of YN1 vs YN4 less than point 5 (microarray). (XLSX 226Â kb

Additional file 15: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S9. Ten categories of TFs with BN oligonucleotides retrieved from stem section comparisons of ...

Additional file 16: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S10. Targeted transcription factors selected for lignin validation using Arabidopsis mutants. ...

Additional file 14: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S8. Differential upregulation of genes involved in cellular carbohydrate metabolic processing....

Additional file 17: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Zakir Hossain (187982)
Bhinu Pillai (5106527)
Margaret Gruber (187990)
Min Yu (120607)
Lisa Amyot (187985)
Abdelali Hannoufa (187993)

April 2018

Table S11. Selected non-TF genes for lignin validation using Arabidopsis mutants. (DOCX 17Â kb

Additional file 1: of Transcriptome analysis of secondary cell wall development in Medicago truncatula

Huanzhong Wang (3453971)
Jung Yang (3453968)
Fang Chen (34476)
Ivone Torres-Jerez (40667)
Yuhong Tang (56216)
Mingyi Wang (91634)
Qian Du (280345)
Xiaofei Cheng (90802)
Jiangqi Wen (612044)
Richard Dixon (3416687)

January 2016

Supplemental Figure 1. Expression pattern analysis of cluster 10 transcription factor genes. Supplem...

Additional file 1: Table S1: of Transcriptome analysis of Brassica napus pod using RNA-Seq and identification of lipid-related candidate genes

Hai-Ming Xu (228762)
Xiang-Dong Kong (3535055)
Fei Chen (13690)
Ji-Xiang Huang (3535049)
Xiang-Yang Lou (228769)
Jian-Yi Zhao (3535052)

October 2015

The top 20 most represented GO terms of DEG in the biological process category at the 5â7 DAF (S1-...

Additional file 2: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Abstract

Extracted data

Additional file 2: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content

Abstract

Extracted data

Related items

Related items