Additional file 5: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Additional file 3: Table S3. of Salivary miRNA profiles identify children with autism spectrum disorder, correlate with adaptive behavior, and implicate ASD candidate genes involved in neurodevelopment

Steven Hicks (3443687)
Cherry Ignacio (3443684)
Karen Gentile (3443681)
Frank Middleton (733667)

April 2016

Top enriched functional clusters revealed by functional annotation clustering of high confidence mRN...

Brain Transcriptional and Epigenetic Associations with Autism

Matthew R. Ginsberg
Robert A. Rubin
Tatiana Falcone
Angela H. Ting
Marvin R. Natowicz

January 2012

Background: Autism is a common neurodevelopmental syndrome. Numerous rare genetic etiologies are rep...

Novel Insight Into the Etiology of Autism Spectrum Disorder Gained by Integrating Expression Data With Genome-wide Association Statistics

Pain, Oliver
Pocklington, Andrew J.
Holmans, Peter A.
Bray, Nicholas J
O'Brien, Heath E.
Hall, Lynsey S.
Pardiñas, Antonio F
O'Donovan, Michael C.
Owen, Michael J.
Anney, Richard

August 2019

Background:A recent genome-wide association study (GWAS) of autism spectrum disorders (ASD) (Ncases=...

Additional file 2: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Thanit Saeliw (5106851)
Chayanin Tangsuwansri (5106863)
Surangrat Thongkorn (5106860)
Weerasak Chonchaiya (5106857)
Kanya Suphapeetiporn (580999)
Apiwat Mutirangura (16235)
Tewin Tencomnao (2864969)
Valerie Hu (5106854)
Tewarit Sarachana (229926)

April 2018

Association analysis between the DEGs in ASD from GSE15402 and the human Alu-inserted genes lists wh...

Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder.

Saeliw, Thanit
Tangsuwansri, Chayanin
Thongkorn, Surangrat
Chonchaiya, Weerasak
Suphapeetiporn, Kanya
Mutirangura, Apiwat
Tencomnao, Tewin
Hu, Valerie W
Sarachana, Tewarit

January 2018

Background: Alu elements are a group of repetitive elements that can influence gene expression throu...

Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Thanit Saeliw
Chayanin Tangsuwansri
Surangrat Thongkorn
Weerasak Chonchaiya
Kanya Suphapeetiporn
Apiwat Mutirangura
Tewin Tencomnao
Valerie W. Hu
Tewarit Sarachana

April 2018

Abstract Background Alu elements are a group of repetitive elements that can influence gene expressi...

Additional file 3: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Full ASD GSEA pre-ranked enrichment results for different molecular signatures (C2, H, GO_BP, GO_CC,...

Refining Attention-Deficit/Hyperactivity Disorder and Autism Spectrum Disorder Genetic Loci by Integrating Summary Data From Genome-wide Association, Gene Expression, and DNA Methylation Studies

September 2020

Background: Recent genome-wide association studies (GWASs) identified the first genetic loci associa...

Additional file 1: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Table S1. Datasets included in our study. Table S2. Age, gender and pmi distributions between cases ...

Additional file 5: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Full differential gene expression meta-analysis results of cancer data. (ZIP 31237 kb

Integrative genomics identifies a convergent molecular subtype that links epigenomic with transcriptomic differences in autism

Mill, Jonathan

September 2020

Autism spectrum disorder (ASD) is a phenotypically and genetically heterogeneous neurodevelopmental ...

Refining attention-deficit/hyperactivity disorder and autism spectrum disorder genetic loci by integrating summary data from genome-wide association, gene expression, and DNA methylation studies.

Hammerschlag, A.R.
Byrne, E.M.
Bartels, M.
Wray, N.R.
Middeldorp, C.M.
eQTLGen Consortium (Müller-Nurasyid, M.

January 2020

Background: Recent genome-wide association studies (GWASs) identified the first genetic loci associa...

Investigation of epigenetic regulatory networks associated with autism spectrum disorder (ASD) by integrated global LINE-1 methylation and gene expression profiling analyses.

Chayanin Tangsuwansri
Thanit Saeliw
Surangrat Thongkorn
Weerasak Chonchaiya
Kanya Suphapeetiporn
Apiwat Mutirangura
Tewin Tencomnao
Valerie Wailin Hu
Tewarit Sarachana

January 2018

BACKGROUND:The exact cause and mechanisms underlying the pathobiology of autism spectrum disorder (A...

Epigenomic signatures reveal mechanistic clues and predictive markers for autism spectrum disorder

LaSalle, Janine M

January 2023

Autism spectrum disorder (ASD) comprises a heterogeneous group of neurodevelopmental outcomes in chi...

Additional file 4: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

gProfileR biological process overrepresentation results of the genes contained in the significant in...

Additional file 3: Table S3. of Salivary miRNA profiles identify children with autism spectrum disorder, correlate with adaptive behavior, and implicate ASD candidate genes involved in neurodevelopment

Steven Hicks (3443687)
Cherry Ignacio (3443684)
Karen Gentile (3443681)
Frank Middleton (733667)

April 2016

Top enriched functional clusters revealed by functional annotation clustering of high confidence mRN...

Brain Transcriptional and Epigenetic Associations with Autism

Matthew R. Ginsberg
Robert A. Rubin
Tatiana Falcone
Angela H. Ting
Marvin R. Natowicz

January 2012

Background: Autism is a common neurodevelopmental syndrome. Numerous rare genetic etiologies are rep...

Novel Insight Into the Etiology of Autism Spectrum Disorder Gained by Integrating Expression Data With Genome-wide Association Statistics

Pain, Oliver
Pocklington, Andrew J.
Holmans, Peter A.
Bray, Nicholas J
O'Brien, Heath E.
Hall, Lynsey S.
Pardiñas, Antonio F
O'Donovan, Michael C.
Owen, Michael J.
Anney, Richard

August 2019

Background:A recent genome-wide association study (GWAS) of autism spectrum disorders (ASD) (Ncases=...

Additional file 2: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Thanit Saeliw (5106851)
Chayanin Tangsuwansri (5106863)
Surangrat Thongkorn (5106860)
Weerasak Chonchaiya (5106857)
Kanya Suphapeetiporn (580999)
Apiwat Mutirangura (16235)
Tewin Tencomnao (2864969)
Valerie Hu (5106854)
Tewarit Sarachana (229926)

April 2018

Association analysis between the DEGs in ASD from GSE15402 and the human Alu-inserted genes lists wh...

Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder.

Saeliw, Thanit
Tangsuwansri, Chayanin
Thongkorn, Surangrat
Chonchaiya, Weerasak
Suphapeetiporn, Kanya
Mutirangura, Apiwat
Tencomnao, Tewin
Hu, Valerie W
Sarachana, Tewarit

January 2018

Background: Alu elements are a group of repetitive elements that can influence gene expression throu...

Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Thanit Saeliw
Chayanin Tangsuwansri
Surangrat Thongkorn
Weerasak Chonchaiya
Kanya Suphapeetiporn
Apiwat Mutirangura
Tewin Tencomnao
Valerie W. Hu
Tewarit Sarachana

April 2018

Abstract Background Alu elements are a group of repetitive elements that can influence gene expressi...

Additional file 3: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Full ASD GSEA pre-ranked enrichment results for different molecular signatures (C2, H, GO_BP, GO_CC,...

Refining Attention-Deficit/Hyperactivity Disorder and Autism Spectrum Disorder Genetic Loci by Integrating Summary Data From Genome-wide Association, Gene Expression, and DNA Methylation Studies

September 2020

Background: Recent genome-wide association studies (GWASs) identified the first genetic loci associa...

Additional file 1: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Table S1. Datasets included in our study. Table S2. Age, gender and pmi distributions between cases ...

Additional file 5: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

Full differential gene expression meta-analysis results of cancer data. (ZIP 31237 kb

Integrative genomics identifies a convergent molecular subtype that links epigenomic with transcriptomic differences in autism

Mill, Jonathan

September 2020

Autism spectrum disorder (ASD) is a phenotypically and genetically heterogeneous neurodevelopmental ...

Refining attention-deficit/hyperactivity disorder and autism spectrum disorder genetic loci by integrating summary data from genome-wide association, gene expression, and DNA methylation studies.

Hammerschlag, A.R.
Byrne, E.M.
Bartels, M.
Wray, N.R.
Middeldorp, C.M.
eQTLGen Consortium (Müller-Nurasyid, M.

January 2020

Background: Recent genome-wide association studies (GWASs) identified the first genetic loci associa...

Investigation of epigenetic regulatory networks associated with autism spectrum disorder (ASD) by integrated global LINE-1 methylation and gene expression profiling analyses.

Chayanin Tangsuwansri
Thanit Saeliw
Surangrat Thongkorn
Weerasak Chonchaiya
Kanya Suphapeetiporn
Apiwat Mutirangura
Tewin Tencomnao
Valerie Wailin Hu
Tewarit Sarachana

January 2018

BACKGROUND:The exact cause and mechanisms underlying the pathobiology of autism spectrum disorder (A...

Epigenomic signatures reveal mechanistic clues and predictive markers for autism spectrum disorder

LaSalle, Janine M

January 2023

Autism spectrum disorder (ASD) comprises a heterogeneous group of neurodevelopmental outcomes in chi...

Additional file 4: of Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

Jaume Forés-Martos (3905047)
Ferrán Catalá-López (321247)
Jon Sánchez-Valle (6566402)
Kristina Ibáñez (525033)
Héctor Tejero (177113)
Helena Palma-Gudiel (5993483)
Joan Climent (6566405)
Vera Pancaldi (3484688)
Lourdes Fañanás (623342)
Celso Arango (2937681)
Mara Parellada (839497)
Anaïs Baudot (6303)
Daniel Vogt (408869)
John Rubenstein (5750219)
Alfonso Valencia (1343)
Rafael Tabarés-Seisdedos (525034)

April 2019

gProfileR biological process overrepresentation results of the genes contained in the significant in...

Additional file 3: Table S3. of Salivary miRNA profiles identify children with autism spectrum disorder, correlate with adaptive behavior, and implicate ASD candidate genes involved in neurodevelopment

Steven Hicks (3443687)
Cherry Ignacio (3443684)
Karen Gentile (3443681)
Frank Middleton (733667)

April 2016

Top enriched functional clusters revealed by functional annotation clustering of high confidence mRN...

Brain Transcriptional and Epigenetic Associations with Autism

Matthew R. Ginsberg
Robert A. Rubin
Tatiana Falcone
Angela H. Ting
Marvin R. Natowicz

January 2012

Background: Autism is a common neurodevelopmental syndrome. Numerous rare genetic etiologies are rep...

Novel Insight Into the Etiology of Autism Spectrum Disorder Gained by Integrating Expression Data With Genome-wide Association Statistics

Pain, Oliver
Pocklington, Andrew J.
Holmans, Peter A.
Bray, Nicholas J
O'Brien, Heath E.
Hall, Lynsey S.
Pardiñas, Antonio F
O'Donovan, Michael C.
Owen, Michael J.
Anney, Richard

August 2019

Background:A recent genome-wide association study (GWAS) of autism spectrum disorders (ASD) (Ncases=...

Additional file 5: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Abstract

Extracted data

Additional file 5: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Abstract

Extracted data

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