<p>(A) The 10 classes of genes in the <i>N</i>. <i>crassa</i> FGSC 2489 strain most affected by Pi availability. (B) The 10 classes of genes in the <i>N</i>. <i>crassa</i> FGSC 9568 strain most impacted by Pi availability. (C, D) The 10 classes of the most affected genes in <i>N</i>. <i>crassa</i> FGSC 9568 with respect to the wild-type strain in the low-Pi (C) and high-Pi (D) culture condition. Significantly enriched categories (P ≤ 0.05) are shown.</p
<p>(A, B) Fold change expression ratio of 9 genes encoding TFs in mutant FGSC 9568 <i>vs</i> FGSC 24...
<p>Processes identified only in fungus-inoculated tissue are considered up-regulated by fungal infec...
<p>The bars show the numbers of genes in each GO Slim category. GO enrichment analysis was conducted...
<p>Gene Ontology categories of genes that are significantly enriched in strain AF70 and NRRL 3357.</...
<p>Statistically overrepresented gene ontology (GO) categories in under-expressed (red) and over-exp...
<p>(a) Significant GO terms (FDR <i>P</i><0.05) over-represented among the up-regulated genes of the...
<p>Differentially expressed genes in BA and PPA groups (t-test compared to control group p<0.01) wer...
<p><sup>a</sup>The most specific GO categories are reported.</p><p><sup>b</sup>Number of genes in th...
Out of 1732 genes/proteins, the 200 genes/proteins with the highest weight (estimated using POPLS-DA...
<p>Shown are the number of genes represented in each GO category. Raw and adjusted P-values are list...
<p>G1–G6 according to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0094642#...
<p>(A) The union of human and mouse gene sets were analyzed using BiNGO software. Significantly enri...
<p>The Gene Ontology (GO) enrichment analysis tool called Gene Onology Tree Machine (GOTM) was used ...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
Tab A. Gene ontology enrichment for the 1800s-focused PBE outliers. Tab B. Gene ontology enrichment ...
<p>(A, B) Fold change expression ratio of 9 genes encoding TFs in mutant FGSC 9568 <i>vs</i> FGSC 24...
<p>Processes identified only in fungus-inoculated tissue are considered up-regulated by fungal infec...
<p>The bars show the numbers of genes in each GO Slim category. GO enrichment analysis was conducted...
<p>Gene Ontology categories of genes that are significantly enriched in strain AF70 and NRRL 3357.</...
<p>Statistically overrepresented gene ontology (GO) categories in under-expressed (red) and over-exp...
<p>(a) Significant GO terms (FDR <i>P</i><0.05) over-represented among the up-regulated genes of the...
<p>Differentially expressed genes in BA and PPA groups (t-test compared to control group p<0.01) wer...
<p><sup>a</sup>The most specific GO categories are reported.</p><p><sup>b</sup>Number of genes in th...
Out of 1732 genes/proteins, the 200 genes/proteins with the highest weight (estimated using POPLS-DA...
<p>Shown are the number of genes represented in each GO category. Raw and adjusted P-values are list...
<p>G1–G6 according to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0094642#...
<p>(A) The union of human and mouse gene sets were analyzed using BiNGO software. Significantly enri...
<p>The Gene Ontology (GO) enrichment analysis tool called Gene Onology Tree Machine (GOTM) was used ...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
Tab A. Gene ontology enrichment for the 1800s-focused PBE outliers. Tab B. Gene ontology enrichment ...
<p>(A, B) Fold change expression ratio of 9 genes encoding TFs in mutant FGSC 9568 <i>vs</i> FGSC 24...
<p>Processes identified only in fungus-inoculated tissue are considered up-regulated by fungal infec...
<p>The bars show the numbers of genes in each GO Slim category. GO enrichment analysis was conducted...