Figure S1. Schematic diagram of E. coli donor strain genotypes. We used three different E. coli strains as our DNA donors. Each strain harbored an F plasmid region (blue) integrated into the tryptophan operon. This region contains the tra genes encoding the proteins involved in conjugation. The donors are tryptophan auxotrophs, caused by the F plasmid insertion into the trp operon. In addition, two origin of transfers (OriTs, green) are inserted into each donor genome (at the pseudogenes mbhA, hyfC genes, or the inactivated genes hsdRS, depending on the donor). Thus, including the OriT region within the F plasmid, each donor strain has three OriT regions. (EPS 376Â kb
Genomic organization of the 25.7Â kb transposon. Genes on the forward strand are depicted as right-s...
Full phylogeny of Rh50 proteins. Figure S2. Phylogeny of Proteobacteria bacterium. Figure S3. Full p...
Figure S1. Electrophoresis Gel displaying the DNA fragments created from RT-PCR of (A) E. coli genes...
Figure S13. Putative recombination breakpoints of butyric acid-evolved clones and the distribution o...
Table S10. Summary of growth parameters of ancestral strains. Growth parameters of the ancestral E. ...
Table S1. E. coli strains and vectors constructed and used in this project. CGSC: The Coli Genetic S...
Excel file S1. List of de novo mutations in coding regions found in sequenced clones isolated from H...
Excel file S2. List of de novo mutations in coding regions found in sequenced clones isolated from b...
Figure S11. Percentage of sequenced clones in which hpa genes appear horizontally transferred. The b...
Table S6. Number of genes suitable to infer horizontally transferred genes for every combination of ...
Figure S6. Proportion of sequence reads per gene that map to the donor genome. In our data, we found...
Text S3. Potentially adaptive gene transfers from the K donor to the W recipient clones during evolu...
Figure S3. No growth of donors and recipients in media used for experimental evolution. Mean growth ...
Table S1. List of E. coli strains whose genomes have been used. Table S2. Distribution of genes from...
Text S2. Genes transferred to the K recipient from only one but not both donors during evolution on ...
Genomic organization of the 25.7Â kb transposon. Genes on the forward strand are depicted as right-s...
Full phylogeny of Rh50 proteins. Figure S2. Phylogeny of Proteobacteria bacterium. Figure S3. Full p...
Figure S1. Electrophoresis Gel displaying the DNA fragments created from RT-PCR of (A) E. coli genes...
Figure S13. Putative recombination breakpoints of butyric acid-evolved clones and the distribution o...
Table S10. Summary of growth parameters of ancestral strains. Growth parameters of the ancestral E. ...
Table S1. E. coli strains and vectors constructed and used in this project. CGSC: The Coli Genetic S...
Excel file S1. List of de novo mutations in coding regions found in sequenced clones isolated from H...
Excel file S2. List of de novo mutations in coding regions found in sequenced clones isolated from b...
Figure S11. Percentage of sequenced clones in which hpa genes appear horizontally transferred. The b...
Table S6. Number of genes suitable to infer horizontally transferred genes for every combination of ...
Figure S6. Proportion of sequence reads per gene that map to the donor genome. In our data, we found...
Text S3. Potentially adaptive gene transfers from the K donor to the W recipient clones during evolu...
Figure S3. No growth of donors and recipients in media used for experimental evolution. Mean growth ...
Table S1. List of E. coli strains whose genomes have been used. Table S2. Distribution of genes from...
Text S2. Genes transferred to the K recipient from only one but not both donors during evolution on ...
Genomic organization of the 25.7Â kb transposon. Genes on the forward strand are depicted as right-s...
Full phylogeny of Rh50 proteins. Figure S2. Phylogeny of Proteobacteria bacterium. Figure S3. Full p...
Figure S1. Electrophoresis Gel displaying the DNA fragments created from RT-PCR of (A) E. coli genes...