Phylogenetic trees constructed based on P1, P2, and P3 regions of EV11 genomes determined in this study along with reference HEV-B sequences.

Phylogenetic analyses of the ConEnv, all consensus Envs, and the longitudinal isolates derived from experimental infection utilized in consensus gene development.

Jodi K. Craigo (421284)
Corin Ezzelarab (421285)
Sheila J. Cook (421286)
Chong Liu (450204)
David Horohov (421287)
Charles J. Issel (421288)
Ronald C. Montelaro (178872)

January 2015

A phylogenetic tree of aligned plasma amino acid sequences (gp90 regions) was constructed by the ...

Rooted phylogenetic trees showing the relationships amongst HEV-A isolates using the different genomic regions.

Yan Zhang (8098)
Xiaojuan Tan (195499)
Aili Cui (203513)
Naiying Mao (282774)
Songtao Xu (169593)
Zhen Zhu (104773)
Jianhui Zhou (141895)
Jing Shi (16730)
Yueping Zhao (282775)
Xianjun Wang (132239)
Xueyong Huang (149227)
Shuangli Zhu (195480)
Yong Zhang (5893)
Wei Tang (53470)
Hua Ling (235402)
Wenbo Xu (148718)

February 2013

The neighbour-joining trees were constructed from alignment of the 5' UTR (a), P1 (b), P2 (c), P3...

Neighbor joining phylogenetic tree generated using nucleotide sequences of the HPV-58 L1 gene.

Yaofei Yue (286744)
Hongying Yang (131218)
Kun Wu (286745)
Lijuan Yang (1538233)
Junying Chen (286746)
Xinwei Huang (286747)
Yue Pan (267516)
Youqing Ruan (286750)
Yujiao Zhao (286754)
Xinan Shi (286756)
Qiangming Sun (286760)
Qihan Li (130629)

February 2013

Study sequences are labeled in black. Others are standard sequences, including: D90400 (Japan), E...

Phylogenetic relationships based on the P1, P2, P3 genome regions among Chinese strains and other EV-A strains.

Qian Yang (300330)
Yong Zhang (5893)
Dongmei Yan (195489)
Shuangli Zhu (195480)
Dongyan Wang (195482)
Tianjiao Ji (1396918)
Xiaolei Li (102381)
Yang Song (1235364)
Xinrui Gu (3605918)
Wenbo Xu (148718)

December 2016

The phylogenetic trees based on the nucleotide sequence for the P1 (a), P2 (b) and ...

Phylogenetic tree constructed based on HEV full-length genomes using the neighbor-joining method.

Hiroko Yamada (789443)
Kazuaki Takahashi (769837)
Olline Lim (789444)
Somana Svay (789445)
Channarena Chuon (789446)
Sirany Hok (789447)
Son Huy Do (789448)
Mayumi Fujimoto (789449)
Tomoyuki Akita (789450)
Noboru Goto (789451)
Keiko Katayama (789452)
Masahiro Arai (789453)
Junko Tanaka (130314)

August 2015

Each of HEV genotypes 1, 2, 3, and 5 is represented by a single isolate, while for genotype 4, al...

Phylogenetic trees based on the complete genome, aa sequences of structural proteins and ORF3 of PEDV strains.

Deping Song (705895)
Dongyan Huang (705896)
Qi Peng (702503)
Tao Huang (110613)
Yanjun Chen (495068)
Tiansheng Zhang (705897)
Xiaowei Nie (566465)
Houjun He (705898)
Ping Wang (42415)
Qinglan Liu (705899)
Yuxin Tang (639327)

March 2015

The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...

Phylogenetic tree of nine VviSOS3 genes.

Yuanchun Ma (5305481)
Li Wang (15202)
Jiaoyang Wang (4902592)
Yan Zhong (316566)
Zong-Ming (Max) Cheng (6482585)

March 2019

A neighbor-joining tree was constructed based on the alignments of the VviSOS3 genes with p-distance...

Phylogenetic tree of selected EV68 strains based on the nucleotide sequence of three genome regions.

Tadatsugu Imamura (461194)
Akira Suzuki (178307)
Socorro Lupisan (339971)
Michiko Okamoto (461195)
Rapunzel Aniceto (339976)
Rutchie J. Egos (461196)
Edgardo E. Daya (461197)
Raita Tamaki (339974)
Mariko Saito (339975)
Naoko Fuji (339968)
Chandra Nath Roy (461198)
Jaime M. Opinion (461199)
Arlene V. Santo (461200)
Noel G. Macalalad (461201)
Amado Tandoc III (5656294)
Lydia Sombrero (339972)
Remigio Olveda (62198)
Hitoshi Oshitani (178316)

September 2013

(a) the partial 5′UTR, (b) partial VP1, and (c) partial VP4/VP2. EV68 strains in this study are i...

The phylogeny of EV-C P2 and P3 regions.

Teemu Smura (428332)
Soile Blomqvist (428333)
Tytti Vuorinen (546170)
Olga Ivanova (546171)
Elena Samoilovich (546172)
Haider Al-Hello (428334)
Carita Savolainen-Kopra (428331)
Tapani Hovi (428330)
Merja Roivainen (204446)

April 2014

The phylogenetic trees constructed from the (a) P2 and (b) P3 coding regions of EV-C strains, of ...

Phylogenetic tree based on the nucleotide sequences of the fusion gene (A) (nt 1–1662) and hemagglutinin-neuraminidase gene (B) (nt 1–1713 or 1731) of NDV.

Shouping Zhang (343810)
Xiaoting Wang (206653)
Changguang Zhao (343812)
Dehua Liu (343815)
Yanxin Hu (172273)
Jixun Zhao (343817)
Guozhong Zhang (343818)

February 2013

The phylogenetic tree was constructed by the Neighbor-Joining method with 1000 bootstrap replicat...

Phylogenetic tree based on sequences of EBER genes by neighbor-joining method.

Zhi-chao Shen (711482)
Bing Luo (711483)
Jian-ning Chen (117093)
Yan Chao (175094)
Chun-kui Shao (5648755)
Qian-qian Liu (711484)
Yun Wang (32846)

March 2015

All the 317 determined EBER sequences in our study and the 19 EBER sequences of reported EBV geno...

Gradual accumulation of mutations in iEV11 illustrated by neighbor-joining tree (A) and plots of the number of nucleotide and amino acid substitutions vs. time of isolation (B).

Majid Laassri (4976732)
Tatiana Zagorodnyaya (799916)
Sharon Hassin-Baer (420354)
Rachel Handsher (67570)
Danit Sofer (67569)
Merav Weil (4976729)
Konstantinos Karagiannis (191147)
Vahan Simonyan (57547)
Konstantin Chumakov (799919)
Lester Shulman (4976726)

March 2018

The analysis was performed for the entire genome of these strains relative to the closest cEV11 i...

The phylogeny of EV-C P1 region.

Teemu Smura (428332)
Soile Blomqvist (428333)
Tytti Vuorinen (546170)
Olga Ivanova (546171)
Elena Samoilovich (546172)
Haider Al-Hello (428334)
Carita Savolainen-Kopra (428331)
Tapani Hovi (428330)
Merja Roivainen (204446)

April 2014

The phylogenetic trees constructed from the P1 coding regions of EV-C strains, of which a complet...

Phylogenetic trees were constructed from the VP1 nucleotide sequences of CV-A6 using neighbor-joining method with 1000 bootstrap by CLC genomics workbench.

Qing-Bin Lu (181722)
Xiao-Ai Zhang (293630)
Ying Wo (293632)
Hong-Mei Xu (293633)
Xiu-Jun Li (181726)
Xian-Jun Wang (244009)
Shu-Jun Ding (293634)
Xiao-Dan Chen (293635)
Cui He (293636)
Li-Juan Liu (293637)
Hao Li (31608)
Hong Yang (37298)
Ting-Yu Li (293639)
Wei Liu (20030)
Wu-Chun Cao (69511)

February 2013

The tree was based on the 552 bp VP1 nucleotide sequences of CV-A6 (nt 2441–2992, responding to A...

Phylogenetic tree using the Neighbor-Joining method, constructed from 16 HBV reference sequences (genotype A-H) and the sequences of the 5 infected infants and their mothers’ viruses.

Vatthanaphone Latthaphasavang (6631256)
Philippe Vanhems (210562)
Nicole Ngo-Giang-Huong (147034)
Philavanh Sibounlang (6631259)
Phimpha Paboriboune (404248)
Laurent Malato (6631262)
Valy Keoluangkhot (6631265)
Syvilay Thammasack (2601406)
Nicolas Salvadori (5704688)
Woottichai Khamduang (147028)
Nicolas Steenkeste (404251)
Christian Trépo (5147186)
Paul Dény (5147171)
Gonzague Jourdain (96227)

April 2019

Phylogenetic tree using the Neighbor-Joining method, constructed from 16 HBV reference sequences (ge...

Phylogenetic analyses of the ConEnv, all consensus Envs, and the longitudinal isolates derived from experimental infection utilized in consensus gene development.

Jodi K. Craigo (421284)
Corin Ezzelarab (421285)
Sheila J. Cook (421286)
Chong Liu (450204)
David Horohov (421287)
Charles J. Issel (421288)
Ronald C. Montelaro (178872)

January 2015

A phylogenetic tree of aligned plasma amino acid sequences (gp90 regions) was constructed by the ...

Rooted phylogenetic trees showing the relationships amongst HEV-A isolates using the different genomic regions.

Yan Zhang (8098)
Xiaojuan Tan (195499)
Aili Cui (203513)
Naiying Mao (282774)
Songtao Xu (169593)
Zhen Zhu (104773)
Jianhui Zhou (141895)
Jing Shi (16730)
Yueping Zhao (282775)
Xianjun Wang (132239)
Xueyong Huang (149227)
Shuangli Zhu (195480)
Yong Zhang (5893)
Wei Tang (53470)
Hua Ling (235402)
Wenbo Xu (148718)

February 2013

The neighbour-joining trees were constructed from alignment of the 5' UTR (a), P1 (b), P2 (c), P3...

Neighbor joining phylogenetic tree generated using nucleotide sequences of the HPV-58 L1 gene.

Yaofei Yue (286744)
Hongying Yang (131218)
Kun Wu (286745)
Lijuan Yang (1538233)
Junying Chen (286746)
Xinwei Huang (286747)
Yue Pan (267516)
Youqing Ruan (286750)
Yujiao Zhao (286754)
Xinan Shi (286756)
Qiangming Sun (286760)
Qihan Li (130629)

February 2013

Study sequences are labeled in black. Others are standard sequences, including: D90400 (Japan), E...

Phylogenetic relationships based on the P1, P2, P3 genome regions among Chinese strains and other EV-A strains.

Qian Yang (300330)
Yong Zhang (5893)
Dongmei Yan (195489)
Shuangli Zhu (195480)
Dongyan Wang (195482)
Tianjiao Ji (1396918)
Xiaolei Li (102381)
Yang Song (1235364)
Xinrui Gu (3605918)
Wenbo Xu (148718)

December 2016

The phylogenetic trees based on the nucleotide sequence for the P1 (a), P2 (b) and ...

Phylogenetic tree constructed based on HEV full-length genomes using the neighbor-joining method.

Hiroko Yamada (789443)
Kazuaki Takahashi (769837)
Olline Lim (789444)
Somana Svay (789445)
Channarena Chuon (789446)
Sirany Hok (789447)
Son Huy Do (789448)
Mayumi Fujimoto (789449)
Tomoyuki Akita (789450)
Noboru Goto (789451)
Keiko Katayama (789452)
Masahiro Arai (789453)
Junko Tanaka (130314)

August 2015

Each of HEV genotypes 1, 2, 3, and 5 is represented by a single isolate, while for genotype 4, al...

Phylogenetic trees based on the complete genome, aa sequences of structural proteins and ORF3 of PEDV strains.

Deping Song (705895)
Dongyan Huang (705896)
Qi Peng (702503)
Tao Huang (110613)
Yanjun Chen (495068)
Tiansheng Zhang (705897)
Xiaowei Nie (566465)
Houjun He (705898)
Ping Wang (42415)
Qinglan Liu (705899)
Yuxin Tang (639327)

March 2015

The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...

Phylogenetic tree of nine VviSOS3 genes.

Yuanchun Ma (5305481)
Li Wang (15202)
Jiaoyang Wang (4902592)
Yan Zhong (316566)
Zong-Ming (Max) Cheng (6482585)

March 2019

A neighbor-joining tree was constructed based on the alignments of the VviSOS3 genes with p-distance...

Phylogenetic tree of selected EV68 strains based on the nucleotide sequence of three genome regions.

Tadatsugu Imamura (461194)
Akira Suzuki (178307)
Socorro Lupisan (339971)
Michiko Okamoto (461195)
Rapunzel Aniceto (339976)
Rutchie J. Egos (461196)
Edgardo E. Daya (461197)
Raita Tamaki (339974)
Mariko Saito (339975)
Naoko Fuji (339968)
Chandra Nath Roy (461198)
Jaime M. Opinion (461199)
Arlene V. Santo (461200)
Noel G. Macalalad (461201)
Amado Tandoc III (5656294)
Lydia Sombrero (339972)
Remigio Olveda (62198)
Hitoshi Oshitani (178316)

September 2013

(a) the partial 5′UTR, (b) partial VP1, and (c) partial VP4/VP2. EV68 strains in this study are i...

The phylogeny of EV-C P2 and P3 regions.

Teemu Smura (428332)
Soile Blomqvist (428333)
Tytti Vuorinen (546170)
Olga Ivanova (546171)
Elena Samoilovich (546172)
Haider Al-Hello (428334)
Carita Savolainen-Kopra (428331)
Tapani Hovi (428330)
Merja Roivainen (204446)

April 2014

The phylogenetic trees constructed from the (a) P2 and (b) P3 coding regions of EV-C strains, of ...

Phylogenetic tree based on the nucleotide sequences of the fusion gene (A) (nt 1–1662) and hemagglutinin-neuraminidase gene (B) (nt 1–1713 or 1731) of NDV.

Shouping Zhang (343810)
Xiaoting Wang (206653)
Changguang Zhao (343812)
Dehua Liu (343815)
Yanxin Hu (172273)
Jixun Zhao (343817)
Guozhong Zhang (343818)

February 2013

The phylogenetic tree was constructed by the Neighbor-Joining method with 1000 bootstrap replicat...

Phylogenetic tree based on sequences of EBER genes by neighbor-joining method.

Zhi-chao Shen (711482)
Bing Luo (711483)
Jian-ning Chen (117093)
Yan Chao (175094)
Chun-kui Shao (5648755)
Qian-qian Liu (711484)
Yun Wang (32846)

March 2015

All the 317 determined EBER sequences in our study and the 19 EBER sequences of reported EBV geno...

Gradual accumulation of mutations in iEV11 illustrated by neighbor-joining tree (A) and plots of the number of nucleotide and amino acid substitutions vs. time of isolation (B).

Majid Laassri (4976732)
Tatiana Zagorodnyaya (799916)
Sharon Hassin-Baer (420354)
Rachel Handsher (67570)
Danit Sofer (67569)
Merav Weil (4976729)
Konstantinos Karagiannis (191147)
Vahan Simonyan (57547)
Konstantin Chumakov (799919)
Lester Shulman (4976726)

March 2018

The analysis was performed for the entire genome of these strains relative to the closest cEV11 i...

The phylogeny of EV-C P1 region.

Teemu Smura (428332)
Soile Blomqvist (428333)
Tytti Vuorinen (546170)
Olga Ivanova (546171)
Elena Samoilovich (546172)
Haider Al-Hello (428334)
Carita Savolainen-Kopra (428331)
Tapani Hovi (428330)
Merja Roivainen (204446)

April 2014

The phylogenetic trees constructed from the P1 coding regions of EV-C strains, of which a complet...

Phylogenetic trees were constructed from the VP1 nucleotide sequences of CV-A6 using neighbor-joining method with 1000 bootstrap by CLC genomics workbench.

Qing-Bin Lu (181722)
Xiao-Ai Zhang (293630)
Ying Wo (293632)
Hong-Mei Xu (293633)
Xiu-Jun Li (181726)
Xian-Jun Wang (244009)
Shu-Jun Ding (293634)
Xiao-Dan Chen (293635)
Cui He (293636)
Li-Juan Liu (293637)
Hao Li (31608)
Hong Yang (37298)
Ting-Yu Li (293639)
Wei Liu (20030)
Wu-Chun Cao (69511)

February 2013

The tree was based on the 552 bp VP1 nucleotide sequences of CV-A6 (nt 2441–2992, responding to A...

Phylogenetic tree using the Neighbor-Joining method, constructed from 16 HBV reference sequences (genotype A-H) and the sequences of the 5 infected infants and their mothers’ viruses.

Vatthanaphone Latthaphasavang (6631256)
Philippe Vanhems (210562)
Nicole Ngo-Giang-Huong (147034)
Philavanh Sibounlang (6631259)
Phimpha Paboriboune (404248)
Laurent Malato (6631262)
Valy Keoluangkhot (6631265)
Syvilay Thammasack (2601406)
Nicolas Salvadori (5704688)
Woottichai Khamduang (147028)
Nicolas Steenkeste (404251)
Christian Trépo (5147186)
Paul Dény (5147171)
Gonzague Jourdain (96227)

April 2019

Phylogenetic tree using the Neighbor-Joining method, constructed from 16 HBV reference sequences (ge...

Phylogenetic analyses of the ConEnv, all consensus Envs, and the longitudinal isolates derived from experimental infection utilized in consensus gene development.

Jodi K. Craigo (421284)
Corin Ezzelarab (421285)
Sheila J. Cook (421286)
Chong Liu (450204)
David Horohov (421287)
Charles J. Issel (421288)
Ronald C. Montelaro (178872)

January 2015

A phylogenetic tree of aligned plasma amino acid sequences (gp90 regions) was constructed by the ...

Rooted phylogenetic trees showing the relationships amongst HEV-A isolates using the different genomic regions.

Yan Zhang (8098)
Xiaojuan Tan (195499)
Aili Cui (203513)
Naiying Mao (282774)
Songtao Xu (169593)
Zhen Zhu (104773)
Jianhui Zhou (141895)
Jing Shi (16730)
Yueping Zhao (282775)
Xianjun Wang (132239)
Xueyong Huang (149227)
Shuangli Zhu (195480)
Yong Zhang (5893)
Wei Tang (53470)
Hua Ling (235402)
Wenbo Xu (148718)

February 2013

The neighbour-joining trees were constructed from alignment of the 5' UTR (a), P1 (b), P2 (c), P3...

Neighbor joining phylogenetic tree generated using nucleotide sequences of the HPV-58 L1 gene.

Yaofei Yue (286744)
Hongying Yang (131218)
Kun Wu (286745)
Lijuan Yang (1538233)
Junying Chen (286746)
Xinwei Huang (286747)
Yue Pan (267516)
Youqing Ruan (286750)
Yujiao Zhao (286754)
Xinan Shi (286756)
Qiangming Sun (286760)
Qihan Li (130629)

February 2013

Study sequences are labeled in black. Others are standard sequences, including: D90400 (Japan), E...

Phylogenetic trees constructed based on P1, P2, and P3 regions of EV11 genomes determined in this study along with reference HEV-B sequences.

Abstract

Extracted data

Phylogenetic trees constructed based on P1, P2, and P3 regions of EV11 genomes determined in this study along with reference HEV-B sequences.

Abstract

Extracted data

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