<p>In the upper part, <i>w</i><sub><i>s</i></sub>-<i>w</i><sub><i>m</i></sub>-plots of three different regulatory systems with similar protein levels in the active states are shown. The plots in the lower part show the results of 500 simulations of corresponding protein time courses, initialized in the inactive state. The protein distributions are visualized by color plots. One exemplary time course is highlighted in white. (A): Linear translation rate. Protein bursts are too small to activate the system. , <i>G</i>(<i>m</i>) = 40<i>m</i>, <i>ν</i> = 0.05. (B): Bursts emerge through accelerated protein dynamics (increase in <i>ν</i>), leading to random activation and inactivation events. Parameters as in (A), except for <i>ν</i> = 0.4. (C):...
<p>(A) Self-activating gene with cooperativity. (B) Phosphorylation-dephosphorylation cycle. (C) Sch...
We analyse a simple gene regulatory system where a protein enhances its own rate of mRNA transcripti...
In this paper we give an overview of some very recent work, as well as presenting a new approach, on...
AbstractMany physiological characteristics of living cells are regulated by protein interaction netw...
<p>(A): mRNA (upper plots) and corresponding protein time courses (lower plots) of reaction systems ...
(a) Protein production mechanism with positive autoregulation in the presence of inducers. (b) Bifur...
Bistability, or more generally multistability, is an important recurring theme in biological systems...
AbstractPositive autoregulation in gene regulation networks has been shown in the past to exhibit st...
Background: In recent years, several stochastic simulation algorithms have been developed to generat...
<p>(A) When the simulation of the system without time delay is performed, the curves from the determ...
<p>(A) Schematic description of the reactions constituting the stochastic protein turnover model. Ge...
<p>(<b>A</b>) Simulation by the full deterministic model, in which each biochemical species is descr...
Stochasticity (that is, randomness) is an inherent property of many biological systems. For example,...
Mathematical models are now gaining in importance for descriptions of biological processes. In this ...
<p>(A) Result of simulating the ODE model with initial conditions corresponding to low concentration...
<p>(A) Self-activating gene with cooperativity. (B) Phosphorylation-dephosphorylation cycle. (C) Sch...
We analyse a simple gene regulatory system where a protein enhances its own rate of mRNA transcripti...
In this paper we give an overview of some very recent work, as well as presenting a new approach, on...
AbstractMany physiological characteristics of living cells are regulated by protein interaction netw...
<p>(A): mRNA (upper plots) and corresponding protein time courses (lower plots) of reaction systems ...
(a) Protein production mechanism with positive autoregulation in the presence of inducers. (b) Bifur...
Bistability, or more generally multistability, is an important recurring theme in biological systems...
AbstractPositive autoregulation in gene regulation networks has been shown in the past to exhibit st...
Background: In recent years, several stochastic simulation algorithms have been developed to generat...
<p>(A) When the simulation of the system without time delay is performed, the curves from the determ...
<p>(A) Schematic description of the reactions constituting the stochastic protein turnover model. Ge...
<p>(<b>A</b>) Simulation by the full deterministic model, in which each biochemical species is descr...
Stochasticity (that is, randomness) is an inherent property of many biological systems. For example,...
Mathematical models are now gaining in importance for descriptions of biological processes. In this ...
<p>(A) Result of simulating the ODE model with initial conditions corresponding to low concentration...
<p>(A) Self-activating gene with cooperativity. (B) Phosphorylation-dephosphorylation cycle. (C) Sch...
We analyse a simple gene regulatory system where a protein enhances its own rate of mRNA transcripti...
In this paper we give an overview of some very recent work, as well as presenting a new approach, on...