Figure S1. UPGMA clustering of the bacterial profiles by 454 pyrosequencing. Figure S2. UPGMA clustering of the long-term bacterial and archaeal profile changes by PCR-DGGE. Figure S3. UPGMA clustering of the short-term bacterial and archaeal profile changes by PCR-DGGE. Figure S4. The bacterial genera with relative abundance increased after transfaunation. The relative abundance was presented as proportions. The phylotypes were either increased after transfaunation. (ZIP 352Â kb
Additional file 7: Table S7. Count software analysis of the 15 taxonomic classes (A) and list of the...
Additional file 1: Table S1. Primers for gene cloning from goat rumen bacterial DNA. Table S2. Micro...
Additional file 11: Supplementary Results 1. Phylogenies built in our study on the basis of 13-843 A...
Supplementary Materials and Tables: Zhou et al. Microbiome rr supplementary materials and tables. (D...
Relative abundance (%) of 20 groups of functional genes representing 204 selected genes (number of a...
Table S1. Primers sequence of targeted rumen bacterial species. Table S2. Metabolic pathway, gene sy...
Table S1. Rumen microbial compositional profiles among three beef breeds. (XLSX 50 kb
Microbial diversity in different fractions of rumen content. a, the OTU numbers in original, solid o...
Table S1. Compositions of the high-forage and high-grain diet on percentage (%) and dry matter bases...
Table S1. Description of the assembly data of the nine samples. Table S2. Comparison of the phyla in...
Additional file 3: Table S3. A: Summary of the assembled contig classification: Number and proportio...
Taxonomy results of ruminal non-methanogen archaea of each samples. Taxonomy results in the level of...
Quantitative information and quality control of sequencing. Metagenomics sequencing information are ...
Multiplex primers used for the identification of bovine respiratory disease-associated bacteria. (DO...
IntroductionIntensive beef cattle production systems are frequently implicated as a source of bacter...
Additional file 7: Table S7. Count software analysis of the 15 taxonomic classes (A) and list of the...
Additional file 1: Table S1. Primers for gene cloning from goat rumen bacterial DNA. Table S2. Micro...
Additional file 11: Supplementary Results 1. Phylogenies built in our study on the basis of 13-843 A...
Supplementary Materials and Tables: Zhou et al. Microbiome rr supplementary materials and tables. (D...
Relative abundance (%) of 20 groups of functional genes representing 204 selected genes (number of a...
Table S1. Primers sequence of targeted rumen bacterial species. Table S2. Metabolic pathway, gene sy...
Table S1. Rumen microbial compositional profiles among three beef breeds. (XLSX 50 kb
Microbial diversity in different fractions of rumen content. a, the OTU numbers in original, solid o...
Table S1. Compositions of the high-forage and high-grain diet on percentage (%) and dry matter bases...
Table S1. Description of the assembly data of the nine samples. Table S2. Comparison of the phyla in...
Additional file 3: Table S3. A: Summary of the assembled contig classification: Number and proportio...
Taxonomy results of ruminal non-methanogen archaea of each samples. Taxonomy results in the level of...
Quantitative information and quality control of sequencing. Metagenomics sequencing information are ...
Multiplex primers used for the identification of bovine respiratory disease-associated bacteria. (DO...
IntroductionIntensive beef cattle production systems are frequently implicated as a source of bacter...
Additional file 7: Table S7. Count software analysis of the 15 taxonomic classes (A) and list of the...
Additional file 1: Table S1. Primers for gene cloning from goat rumen bacterial DNA. Table S2. Micro...
Additional file 11: Supplementary Results 1. Phylogenies built in our study on the basis of 13-843 A...