We have developed a software package based on a genetic algorithm that fits an analytic function to a given set of data points. The code, called GAFit, was also interfaced with the CHARMM and MOPAC programs in order to facilitate force field parameterizations and fittings of specific reaction parameters (SRP) for semiempirical Hamiltonians. The present tool may be applied to a wide range of fitting problems, though it has been especially designed to significantly reduce the hard work involved in the development of potential energy surfaces for complex systems. For this purpose, it has been equipped with several programs to help the user in the preparation of the input files. We showcase the application of the computational tool to several c...
We present an efficient scheme for parametrizing complex molecule-surface force fields from ab initi...
Abstract The process of ligand binding to a biological target can be represented as the equilibrium ...
AbstractAny molecular dynamical calculation requires a precise knowledge of interaction potential as...
The potential energy surface of a molecular system governs many of its chemical properties, and par...
The program PAROPT has been written to extract forcefield parameters from ab initio calculations of ...
International audienceObtaining the potential energy surface (PES) of a system is often a complex an...
Texto completo: acesso restrito. p. 1-15We propose a two-step genetic algorithm (GA) to fit potentia...
New developments in the field of theoretical chemistry require the computation of numerous Molecular...
Author Institution: Guelph-Waterloo Centre for Graduate Work in Chemistry and; Biochemistry, Univers...
The process of ligand binding to a biological target can be represented as the equilibrium between t...
The Density-Functional Tight Binding (DFTB) method is a popular semiempirical approximation to Densi...
This manual describes program DPotFit, which performs least-squares fits of diatomic molecule spec-t...
Free energy calculation has long been an important goal for molecular dynamics simulation and force ...
Free energy calculation has long been an important goal for molecular dynamics simulation and force ...
A central goal of molecular simulations is to predict physical or chemical properties such that cost...
We present an efficient scheme for parametrizing complex molecule-surface force fields from ab initi...
Abstract The process of ligand binding to a biological target can be represented as the equilibrium ...
AbstractAny molecular dynamical calculation requires a precise knowledge of interaction potential as...
The potential energy surface of a molecular system governs many of its chemical properties, and par...
The program PAROPT has been written to extract forcefield parameters from ab initio calculations of ...
International audienceObtaining the potential energy surface (PES) of a system is often a complex an...
Texto completo: acesso restrito. p. 1-15We propose a two-step genetic algorithm (GA) to fit potentia...
New developments in the field of theoretical chemistry require the computation of numerous Molecular...
Author Institution: Guelph-Waterloo Centre for Graduate Work in Chemistry and; Biochemistry, Univers...
The process of ligand binding to a biological target can be represented as the equilibrium between t...
The Density-Functional Tight Binding (DFTB) method is a popular semiempirical approximation to Densi...
This manual describes program DPotFit, which performs least-squares fits of diatomic molecule spec-t...
Free energy calculation has long been an important goal for molecular dynamics simulation and force ...
Free energy calculation has long been an important goal for molecular dynamics simulation and force ...
A central goal of molecular simulations is to predict physical or chemical properties such that cost...
We present an efficient scheme for parametrizing complex molecule-surface force fields from ab initi...
Abstract The process of ligand binding to a biological target can be represented as the equilibrium ...
AbstractAny molecular dynamical calculation requires a precise knowledge of interaction potential as...