Hierarchical clustering of expression patterns of 20 core and rim samples ()
- Tim Demuth (89229)
- Jessica L Rennert (89230)
- Dominique B Hoelzinger (89231)
- Linsey B Reavie (89232)
- Mitsutoshi Nakada (89233)
- Christian Beaudry (89234)
- Satoko Nakada (89235)
- Eric M Anderson (89236)
- Amanda N Henrichs (89237)
- Wendy S McDonough (89238)
- David Holz (89239)
- Anna Joy (89240)
- Richard Lin (89241)
- Kuang H Pan (89242)
- Chih J Lih (89243)
- Stan N Cohen (89244)
- Michael E Berens (89245)
DOIAbstract
Scatterplot of principal component (PC) 9 against PC10 reveals two clouds representing core (black symbols) and rim samples (white symbols), respectively (). Proband gene AK098354 shows strong correlation with PC9, containing genes down-regulated in rim population () while cystein rich 61 (Cyr61) exhibits strong correlation with up-regulation pattern of PC10 (). GABRIEL was used to detect genes with similar expression patterns to proband genes AK098354 and Cyr61 ().<p><b>Copyright information:</b></p><p>Taken from "Glioma cells on the run – the migratory transcriptome of 10 human glioma cell lines"</p><p>http://www.biomedcentral.com/1471-2164/9/54</p><p>BMC Genomics 2008;9():54-54.</p><p>Published online 29 Jan 2008</p><p>PMCID:PMC2275271.<...
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