Network representation of the relationship between gene expression and gene function

Thirty-nine gene expression clusters (broad and restricted) together with the most significantly enriched GO terms and Uniprot domains (italicized) are organized in two-dimensional space by a force directed layout as in Figure 9. The strength of links between expression clusters and GO/Uniprot terms is determined by the level of enrichment of the GO/Uniprot term within the expression cluster (using z-scores in Additional data file 8). The strength of links between pairs of expression clusters and pairs of GO/Uniprot terms are determined by comparing similarity with respect to the opposite class (so that expression clusters are compared with respect to the GO/Uniprot terms they have similarity with, and vice versa; see Materials and methods). Expression cluster representative images: Cl1B ; Cl2B ; Cl3B 8; Cl4B ; Cl5B ; Cl6B ; Cl9B ; Cl10B ; Cl1R ; Cl2R ; Cl3R ; Cl4R ; Cl5R ; Cl6R ; Cl7R ; Cl8R ; Cl9R ; Cl10R ; Cl11R 7; Cl12R ; Cl13R ; Cl14R ; Cl15R ; Cl16R ; Cl17R ; Cl18R CG6429; Cl19R ; Cl20R ; Cl21R ; Cl22R CG9925; Cl23R ; Cl24R ; Cl25R ; Cl26R ; Cl27R ; Cl28R ; Cl29R 7.<p><b>Copyright information:</b></p><p>Taken from "Global analysis of patterns of gene expression during embryogenesis"</p><p>http://genomebiology.com/2007/8/7/R145</p><p>Genome Biology 2007;8(7):R145-R145.</p><p>Published online 23 Jul 2007</p><p>PMCID:PMC2323238.</p><p>