<p>Sample similarities are expressed as Pearson correlations, which were calculated for peptide feature intensities between different sample preparation replicates (experimental), different time point (temporal), and subjects (A, B, C) (ND: not determined; SD: standard deviation; n: number of comparisons). Column “A, B” presents data from an experiment in which the metaproteome of subjects A and B time point one were analysed and column “A, B, C” shows data of a repetition of those samples and an addition of a second time point and subject C. For detailed experimental setup see “<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029913#s4" target="_blank">Material and Methods</a>” <a href="http://www.plosone.org/article/...
Background: In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study w...
In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study was performed...
Although genetic approaches are the standard in microbiome analysis, proteome-level information is l...
<p>Non-metric multidimensional scaling (nMDS) of distal gut metaproteomes from CD twin cohort. The d...
Metaproteomics has matured into a powerful tool to assess functional interactions in microbial commu...
International audienceMetaproteomics has matured into a powerful tool to assess functional interacti...
<p>The correlation of the levels of metabolites in metabolomic analysis (<b>A</b>) and transcripts i...
<p>Estimated molecular weights are indicated on the left. Arrows on the right (upper arrow: 80 kDa, ...
Figure S1. Analysis of murine fecal metaproteome data in the study of Tanca et al. using MetaPro-IQ ...
X and Y axes: fold-changes between MCF7 and MCF10A for the microarray-probeset and quantitative-pept...
<p>A) Number of peptide sequences (left) and peptide-spectrum matches (PSMs, right) identified in th...
1<p>Total number of peptide quantified in two independent experiments. All proteins and quantified p...
<p>Boxplots showing no significant difference for within group similarity of the GI microbial commun...
The correlation of the parameters for 144 peptides across 4 sets of 3 technical replicates (3,456 po...
Background - Peptide spectrum matching (PSM) is the standard method in shotgun proteomics data analy...
Background: In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study w...
In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study was performed...
Although genetic approaches are the standard in microbiome analysis, proteome-level information is l...
<p>Non-metric multidimensional scaling (nMDS) of distal gut metaproteomes from CD twin cohort. The d...
Metaproteomics has matured into a powerful tool to assess functional interactions in microbial commu...
International audienceMetaproteomics has matured into a powerful tool to assess functional interacti...
<p>The correlation of the levels of metabolites in metabolomic analysis (<b>A</b>) and transcripts i...
<p>Estimated molecular weights are indicated on the left. Arrows on the right (upper arrow: 80 kDa, ...
Figure S1. Analysis of murine fecal metaproteome data in the study of Tanca et al. using MetaPro-IQ ...
X and Y axes: fold-changes between MCF7 and MCF10A for the microarray-probeset and quantitative-pept...
<p>A) Number of peptide sequences (left) and peptide-spectrum matches (PSMs, right) identified in th...
1<p>Total number of peptide quantified in two independent experiments. All proteins and quantified p...
<p>Boxplots showing no significant difference for within group similarity of the GI microbial commun...
The correlation of the parameters for 144 peptides across 4 sets of 3 technical replicates (3,456 po...
Background - Peptide spectrum matching (PSM) is the standard method in shotgun proteomics data analy...
Background: In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study w...
In the Addona et al. paper (Nature Biotechnology 2009), a large-scale multi-site study was performed...
Although genetic approaches are the standard in microbiome analysis, proteome-level information is l...